Pairwise Alignments

Query, 274 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

Subject, 261 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, permease component from Pseudomonas stutzeri RCH2

 Score =  112 bits (279), Expect = 1e-29
 Identities = 76/241 (31%), Positives = 116/241 (48%), Gaps = 1/241 (0%)

Query: 32  PWTAFAALLALWFAAHHFGWVPAKYLPSPLAVVQRLIREVTAGTLLHDLHDTLRRNLSGL 91
           PW    ALLA W  A  FG +  + LP P AV+      + +G L   L  +  R   G 
Sbjct: 12  PWALPVALLAAWQGAVVFGLLSTRILPGPSAVLAAGWDLLGSGELWTHLTISGWRAGIGF 71

Query: 92  VIGVAAGLALGALLGASSLVGRIVGPTVLAQRQTALFAWVPLLAMWFGGGDTGKITFIAV 151
            IG   GL LG + G S+   R++  +V   R     A +PL+ +WFG  ++ KI  +A+
Sbjct: 72  AIGGGIGLLLGFITGLSTWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVAL 131

Query: 152 AAFQPVVIGTWRGISLVPATFRELSDVLLLSRWNYMRLVALPHALPMIFTGLHGALIYAW 211
               P+ + T+ GI  V     E++    LS +   R V LP ALP I  G+  AL + W
Sbjct: 132 GTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFALFRQVILPGALPSILVGVRFALGFMW 191

Query: 212 LATVGSELFLNISPGLGGRLNEGSQLFEIDLLFLVILLFGLIGLGFNTLAERAEGLLIRW 271
           L  + +E  ++ S G+G       +  + D++ L ILL+ L+G   +  A   E   +RW
Sbjct: 192 LTLIVAET-ISASAGIGYLAMNAREFLQTDVVVLAILLYALLGKLADLAARSLERAWLRW 250

Query: 272 N 272
           +
Sbjct: 251 H 251