Pairwise Alignments

Query, 274 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

Subject, 265 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 70/243 (28%), Positives = 105/243 (43%), Gaps = 6/243 (2%)

Query: 32  PWTAFAALLALWFAAHHFGWVPAKYLPSPLAVVQRLIREVTA----GTLLHD-LHDTLRR 86
           P  + A     W      G VP   L +P  V Q L  + T     G LLH     +++ 
Sbjct: 19  PILSVATFFIAWEIVVRTGVVPDTMLAAPTTVTQLLFDKFTNMDPDGALLHQHAWVSIQE 78

Query: 87  NLSGLVIGVAAGLALGALLGASSLVGRIVGPTVLAQRQTALFAWVPLLAMWFGGGDTGKI 146
              G  + +A GL LG  +G  ++   +  P     R     AW+PL   WFG G  GKI
Sbjct: 79  AFGGYFLALAVGLPLGLAMGWFNVAEGLARPIFEIIRPIPPVAWIPLTIFWFGIGLPGKI 138

Query: 147 TFIAVAAFQPVVIGTWRGISLVPATFRELSDVLLLSRWNYMRLVALPHALPMIFTGLHGA 206
             I +    P VI  + G+ +   T  +++     S W   + + +P ALPM+F  L  A
Sbjct: 139 FIIWLGGLVPCVINAYVGVKMTNPTLIQMARTYGASDWQIFKQLCIPSALPMVFGALQIA 198

Query: 207 LIYAWLATVGSELFLNISPGLGGRLNEGSQLFEIDLLFLVILLFGLIGLGFNTLAERAEG 266
           L   W   V +EL L    GLG  +  G +L   +++ L + + GL G     + +R E 
Sbjct: 199 LACCWTNLVAAEL-LAADAGLGFMITMGRRLAMPEMVVLGMFMVGLTGAFIGVVIDRVEK 257

Query: 267 LLI 269
            L+
Sbjct: 258 RLL 260