Pairwise Alignments

Query, 274 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

Subject, 522 a.a., ABC transporter permease from Klebsiella michiganensis M5al

 Score =  155 bits (393), Expect = 1e-42
 Identities = 90/254 (35%), Positives = 130/254 (51%), Gaps = 6/254 (2%)

Query: 27  RIDWRPWTAFAAL------LALWFAAHHFGWVPAKYLPSPLAVVQRLIREVTAGTLLHDL 80
           R+ W+P  ++ AL      LALW  A  +GW+      SPLAV  R ++   +G L   +
Sbjct: 266 RLAWKPQASWRALQLPLVLLALWQLASQWGWIDGALFSSPLAVATRFMQGALSGELTAAM 325

Query: 81  HDTLRRNLSGLVIGVAAGLALGALLGASSLVGRIVGPTVLAQRQTALFAWVPLLAMWFGG 140
             +L R   G V+G+A GL  G LL      G+I  PT+   R  ALFAW+PLL  W G 
Sbjct: 326 LASLGRAFVGGVLGIAGGLLCGLLLALRPRAGQIFTPTLNVLRHIALFAWLPLLTAWVGN 385

Query: 141 GDTGKITFIAVAAFQPVVIGTWRGISLVPATFRELSDVLLLSRWNYMRLVALPHALPMIF 200
            + GKI FIA+A+F P+   T + +        E++ VL L     +R V LP A P IF
Sbjct: 386 DNGGKIVFIALASFFPMFFSTRQAVLQRNPQLDEVARVLRLGEVARLRRVILPGAAPGIF 445

Query: 201 TGLHGALIYAWLATVGSELFLNISPGLGGRLNEGSQLFEIDLLFLVILLFGLIGLGFNTL 260
            GL  ALIYAWL  +G+E F++   G+G  +    QL ++  +   ++L G+ G   +  
Sbjct: 446 AGLRLALIYAWLGNIGAEYFMSSGVGIGSLMINAQQLLDMPTILCGMVLVGITGAALDKA 505

Query: 261 AERAEGLLIRWNNR 274
               E  + RW  +
Sbjct: 506 GRLLEMRVTRWRQQ 519



 Score =  139 bits (350), Expect = 1e-37
 Identities = 85/245 (34%), Positives = 126/245 (51%), Gaps = 2/245 (0%)

Query: 27  RIDWRPWTAFAALLALWFAAHHFGWVPAKYLPSPLAVVQRLIREVTAGTLLHDLHDTLRR 86
           R++  PW   A LL LW+ A   GW+P + LP+P  V    +  + +G LL     +L+ 
Sbjct: 17  RLNGWPWLLPALLLLLWYVAAREGWMPEQILPAPSVVADTAL-SLLSGDLLAQWGFSLQH 75

Query: 87  NLSGLVIGVAAGLALGALLGASSLVGRIVGPTVLAQRQTALFAWVPLLAMWFGGGDTGKI 146
              GL++G  AG  LGAL G      + V P   A  Q     W+PL  + FG  +  K+
Sbjct: 76  LALGLLLGATAGTLLGALFGLVPAAAQRVEPLFYALAQIPTLGWIPLFMVLFGIDNGLKL 135

Query: 147 TFIAVAAFQPVVIGTWRGISLVPATFRELSDVLLLSRWNYMRLVALPHALPMIFTGLHGA 206
             I      P+ I T + ++ VP T  E + V+  SRW  +R + +P +LP  FTGL  A
Sbjct: 136 AVIVKTTVVPMTINTQQAVAGVPLTLSEAARVMNFSRWQRLRWLEIPASLPGWFTGLRLA 195

Query: 207 LIYAWLATVGSELFLNISPGLGGRLNEGSQLFEIDLLFLVILLFGLIGLGFNTLAERAEG 266
           L  AW++ +  EL L  S G+G  +  G QLF++D++F+ I + GL G+     A RA  
Sbjct: 196 LSQAWVSLIVVEL-LASSEGIGYLMVWGRQLFQLDIVFVTIAVVGLSGMLMEWAANRACA 254

Query: 267 LLIRW 271
            L+ W
Sbjct: 255 RLVFW 259