Pairwise Alignments

Query, 279 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis S2

 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 14/188 (7%)

Query: 34  GADAHANTQAGGTLRIGIGWLPPPETPDMRLYAEEG----FDLDLAAEIARGMGVRPEL- 88
           G  +  NT   GTL +G+    PP      +Y E G    FD DL  EIA+ M +  +  
Sbjct: 22  GCISSQNTMKRGTLTVGVCAQYPPT-----IYEENGNLAGFDFDLMNEIAKRMNLNTDFK 76

Query: 89  ILVAPDDAAQALAAGEVDLVVARAGAGDGLRRGARIVETGFESGLSIVMRSDRPLASWAD 148
           I  +  +   AL   EVD + +R       R+        +   + + +     +    +
Sbjct: 77  IYNSKSELFDALEKNEVDCIGSRT-VNYERRKFVDFTRVYYYDSVRVAVPESSSVTLLKE 135

Query: 149 LKGR---VVCASEANRHGRDLAQRLGATVKVERAPAVALMHVRTGECDAAIHDRVLLDPL 205
           LKG+   V+  S ++         +G        P      V  GE DA I   + L+ +
Sbjct: 136 LKGKNLGVIEGSVSSELVESYLTNIGCKCLYYDTPENLTNAVENGEVDAVIGHEMYLEHI 195

Query: 206 FSKLSWQK 213
            +K + QK
Sbjct: 196 STKCNVQK 203