Pairwise Alignments

Query, 286 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 306 a.a., high-affinity branched-chain amino acid ABC ransporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  128 bits (322), Expect = 1e-34
 Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 16/295 (5%)

Query: 3   QLIFNGLVTGLLIALPALSLALVFSVLRFANYAIGAMLTVGAYLVY-----------GFN 51
           Q IFN L  G   AL AL   LV+ VL   N+A G +  VGAY+ +           GF 
Sbjct: 6   QNIFNALQWGSFYALIALGYTLVYGVLLLINFAHGDIFMVGAYISFFVASILLGQIGGFF 65

Query: 52  AGLG-LPLPIAALAGSLAAAGLALVINRLVYDRLRDRGGVTL--LVASIGVGIALENAVR 108
              G + L +      +  AG+ + + R+ Y  LR +G   L  ++ ++  GI LEN   
Sbjct: 66  ELSGPMALALTVPLTMVLTAGVGVTLERVAYRPLRRKGAHRLYVVITALMCGIMLENGNL 125

Query: 109 FIAGSSTRGFQVDVARPVRLWG-LRINHEQIVTIITVLVALTLVWVIFRYTRLGRAMRAV 167
            + G+S +     + + V   G + + + +++ I+T  +   L+  I   TR+G AMRAV
Sbjct: 126 ALLGASRKALPEMIDKVVYTIGTVSVTNLKLMVIVTAFLVFALLQFIVTRTRIGMAMRAV 185

Query: 168 ADNADLAAVRGVPRGQVVTVVWVLSAVLATLAGVLVGLDGNV-DPQMGWNYVLPVFTAAI 226
           A +     + G+P   ++   +VL +  A LAG+L  +   + DP MG       F AA+
Sbjct: 186 AWDKFALPLMGIPLDSIIVFTFVLGSGFAGLAGLLFAMSYPILDPYMGAMVGWKAFIAAV 245

Query: 227 LGGIGNPMAAVAGAVLLGITEELATLVLAPHYRTMVAFAVMALILLFRPTGLFGV 281
           +GGIG+   A  G  LL   E +   V    +R + AF+++  I+  RPTGLFGV
Sbjct: 246 VGGIGDIRGAFIGGFLLAFIEIMVAAVFPSTFRDLFAFSILLFIMWQRPTGLFGV 300