Pairwise Alignments

Query, 343 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Xanthobacter sp. DMC5

Subject, 375 a.a., Holliday junction DNA helicase B from Synechococcus elongatus PCC 7942

 Score =  329 bits (844), Expect = 6e-95
 Identities = 172/322 (53%), Positives = 225/322 (69%)

Query: 17  DSTLRPQLLSEFVGQAQARANLEIFIKAARARGEALDHVLFVGPPGLGKTTLAQIMSREM 76
           +  +RPQ L++++GQ + +  L I I AA++R E+LDH+L  GPPGLGKTT+A +++ EM
Sbjct: 45  EDQIRPQRLADYIGQPELKDVLGIAIAAAKSRQESLDHLLLYGPPGLGKTTMALVLATEM 104

Query: 77  GVGFRSTSGPVIAKAGDLAAILTNLEERDVLFIDEIHRLSPAVEEILYPAMEDYELDLVI 136
           GV  R T+ P + +  D+  +L NL+  DVLFIDEIHRL    EEILYPAMED+ LD+ I
Sbjct: 105 GVQCRITTAPALERPRDIVGLLVNLQPGDVLFIDEIHRLPKVTEEILYPAMEDFRLDITI 164

Query: 137 GEGPAARSVKISLPKFTLVGATTRSGLLTTPLRDRFGIPVRLQFYTVEELEKIVVRGARV 196
           G+G +AR+  I+L  FTLVGATT+ G LT+PLRDRFG+  RL+FY VE L  IV R AR+
Sbjct: 165 GKGQSARTRSITLQPFTLVGATTQIGALTSPLRDRFGLVQRLRFYEVEALTDIVQRTARL 224

Query: 197 MGIAIAPDGATEIARRARGTPRIAGRLLRRVRDFALVAEAERIDRKIADRALLALEVDAA 256
           +   +   GA EIA+R+RGTPRIA RLLRRVRD+A V     I   IA  AL    VD  
Sbjct: 225 LNTPLDQAGAEEIAKRSRGTPRIANRLLRRVRDYAAVKAPGPITGAIAATALELYNVDPC 284

Query: 257 GLDAMDRRYLTVIAEFYGGGPVGVDTLAAALSEPRDAIEEIVEPFLVQQGFIQRTPRGRM 316
           GLD  DRR L+ + E +GGGPVG++TLAAA  E    +EE+ EP+L+Q G++QRTPRGR+
Sbjct: 285 GLDWTDRRLLSHLIENFGGGPVGLETLAAATGEDAQTVEEVYEPYLLQIGYLQRTPRGRV 344

Query: 317 LTGAAFRHLGLAEPPSVKQMPL 338
            T AA+RHLG   P +  Q+ L
Sbjct: 345 ATPAAWRHLGYEPPQASGQLTL 366