Pairwise Alignments

Query, 343 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Xanthobacter sp. DMC5

Subject, 334 a.a., Holliday junction DNA helicase RuvB (RefSeq) from Shewanella amazonensis SB2B

 Score =  412 bits (1058), Expect = e-120
 Identities = 207/328 (63%), Positives = 254/328 (77%), Gaps = 1/328 (0%)

Query: 4   RLLSGEKRG-DDAADSTLRPQLLSEFVGQAQARANLEIFIKAARARGEALDHVLFVGPPG 62
           RL+  +  G +D  D  +RP+LL E+ GQ   RA L++FI+AA+ RGEALDH+L  GPPG
Sbjct: 6   RLIQPQDLGQEDVIDRAMRPKLLDEYTGQDDTRAQLKVFIEAAKKRGEALDHMLIYGPPG 65

Query: 63  LGKTTLAQIMSREMGVGFRSTSGPVIAKAGDLAAILTNLEERDVLFIDEIHRLSPAVEEI 122
           LGKTTLA I++ EMGV  +STSGPV+ KAGDLAA+LTNLEE DVLFIDEIHRLSP VEEI
Sbjct: 66  LGKTTLANIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEEGDVLFIDEIHRLSPVVEEI 125

Query: 123 LYPAMEDYELDLVIGEGPAARSVKISLPKFTLVGATTRSGLLTTPLRDRFGIPVRLQFYT 182
           LYPAMEDY+LD++IGEGPAARS+K+ LP FTLVGATTR+G LT+PLR RFGIP+RL+FY 
Sbjct: 126 LYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRARFGIPLRLEFYN 185

Query: 183 VEELEKIVVRGARVMGIAIAPDGATEIARRARGTPRIAGRLLRRVRDFALVAEAERIDRK 242
           V +L  IV R A+VM + +   GA EIARR+RGTPRIA RLLRRVRDFA V     I R 
Sbjct: 186 VRDLSSIVARSAKVMDVPMDEGGAEEIARRSRGTPRIANRLLRRVRDFAEVKHDGAISRA 245

Query: 243 IADRALLALEVDAAGLDAMDRRYLTVIAEFYGGGPVGVDTLAAALSEPRDAIEEIVEPFL 302
           +A  AL  L+VD+ G D MDR+ L  I + + GGPVG+D LAAA+ E R+ IE+++EPFL
Sbjct: 246 VAQSALDLLDVDSEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDVLEPFL 305

Query: 303 VQQGFIQRTPRGRMLTGAAFRHLGLAEP 330
           +QQGF+QRTPRGR+ T  A+ H  L +P
Sbjct: 306 IQQGFVQRTPRGRIATARAYSHFDLIKP 333