Pairwise Alignments

Query, 919 a.a., DNA gyrase subunit A from Xanthobacter sp. DMC5

Subject, 910 a.a., DNA gyrase/topoisomerase IV subunit A from Parabacteroides merdae CL09T00C40

 Score =  184 bits (466), Expect = 3e-50
 Identities = 162/529 (30%), Positives = 249/529 (47%), Gaps = 63/529 (11%)

Query: 30  YLDYAMSVIVARALPDVRDGLKPVHRRILFSMHENGYEWNKQYRKSARVVGDVIGKYHPH 89
           +LDYA  VI+ RA+P + DGLKPV RRIL SM       + +Y K A +VG  + ++HPH
Sbjct: 66  FLDYASYVILERAVPHINDGLKPVQRRILHSMKRLD---DGRYNKVANIVGHTM-QFHPH 121

Query: 90  GDQSVYDALVRMAQTFAMRVPLVDGQGNFGSV-DGDAPAAMRYTEVRLEKVTNTLLDDLD 148
           GD S+ DALV++ Q    +  L+D QGN+G++  GD  AA RY E RL K    L    +
Sbjct: 122 GDASIGDALVQLGQ----KDLLIDCQGNWGNILTGDGAAAPRYIEARLSKFA--LETVFN 175

Query: 149 KETVDFQDNYDNSEHEPTVLPAKFPNLLVNGAGGIAVGMATNIPPHNLGEIIDVTVALLD 208
            +T  +Q +YD    EP  LP KFP LL  G  GIAVG+++ I PHN  E++D +VA L 
Sbjct: 176 PKTTLWQLSYDGRNKEPVTLPVKFPLLLAQGVEGIAVGLSSKILPHNFNELLDASVAYLR 235

Query: 209 DPLLEPEALLDLLPGPDFPTGALILGRTGIRQAYLTGR--GSILMRAKVAIEHIRKDREA 266
                     +    PDF TG  I         Y  G   GS+ +RAK+     + D + 
Sbjct: 236 GE--------EFTLYPDFQTGGYI-----DVSKYNDGERGGSVKVRAKIT----KLDNKT 278

Query: 267 LIVTEIPYQVNKATMIEKIAELVRDKRVEGISEIRDESDRDGMRVVIEIKRDAQADVVLN 326
           L+++EIPY    +T+IE I +   DK    I ++ D + R+ + +++ +     +D  ++
Sbjct: 279 LVISEIPYGKTTSTLIESILK-ANDKGKIKIKKVDDNTARN-VEILVHLAPGVSSDKTID 336

Query: 327 NLYRLTLLQTSFGVNMVALSGGKPGILTLHDVLTAFIAFREEVISRRTKFLLRKARDRAH 386
            LY  T  + S   N   +   KP  LT+ DVL        +  +  T  LLR   +   
Sbjct: 337 ALYAFTDCEISISPNCCVIMDNKPHFLTVSDVL--------KHSTDDTLHLLRTELEIQK 388

Query: 387 VLVGLAIAVANIDEVIRLIRTAPDPATARESLMGRDWPAKDMAPLIALIADPRHKLKEDG 446
             +  ++  A+++++    R   D              AKDM   IA I       K   
Sbjct: 389 GELEESLFFASLEKIFIEERIYKDKEFEE---------AKDMDEAIAHIDRRLDLFKPHF 439

Query: 447 TYRLSEVQARAILDLRLQRLTALGRDEIAEELDKLAAEIADYLEILASRPRMRAII---- 502
              ++      ++++++ R+       +    DK  A IA Y E +A      A I    
Sbjct: 440 IREVTREDILKLMEIKMGRI-------LKFNTDKCNATIAQYKEDIAKIDDHLAHIVDYT 492

Query: 503 RDELLAIKAEFGT--PRRTEIVEGFGDLEDEDLIQREEMVVTVSHAGYI 549
            D  + +K ++G   PR TE V  F  +E   +++  E +      G+I
Sbjct: 493 ADWFMMLKEKYGKNYPRMTE-VRNFDTIEATKVVEANEKLYINRAEGFI 540