Pairwise Alignments

Query, 919 a.a., DNA gyrase subunit A from Xanthobacter sp. DMC5

Subject, 908 a.a., DNA gyrase subunit GyrA from Phaeobacter inhibens DSM 17395

 Score = 1053 bits (2723), Expect = 0.0
 Identities = 539/910 (59%), Positives = 692/910 (76%), Gaps = 16/910 (1%)

Query: 13  PPSDIRPVSITEELSRSYLDYAMSVIVARALPDVRDGLKPVHRRILFSMHENGYEWNKQY 72
           P  D   VSI  E+  SYLDYAMSVIV+RA+PD+RDGLKPVHRRIL++MHE G   +K Y
Sbjct: 9   PKYDGPTVSIESEMRTSYLDYAMSVIVSRAIPDLRDGLKPVHRRILYAMHEVGNSHDKPY 68

Query: 73  RKSARVVGDVIGKYHPHGDQSVYDALVRMAQTFAMRVPLVDGQGNFGSVDGDAPAAMRYT 132
           RKSAR VGDV+GKYHPHGD ++YDALVRMAQ F+M +PL+DGQGNFGS+DGD PAAMRYT
Sbjct: 69  RKSARPVGDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLDGQGNFGSMDGDNPAAMRYT 128

Query: 133 EVRLEKVTNTLLDDLDKETVDFQDNYDNSEHEPTVLPAKFPNLLVNGAGGIAVGMATNIP 192
           EVR++K   ++L D++K+TVDFQDNYD  + EPTVLPA+FPN+LVNGAGGIAVGMATNIP
Sbjct: 129 EVRMDKPAASILADIEKDTVDFQDNYDGKDREPTVLPARFPNMLVNGAGGIAVGMATNIP 188

Query: 193 PHNLGEIIDVTVALLDDPLLEPEALLDLLPGPDFPTGALILGRTGIRQAYLTGRGSILMR 252
           PHNLGE+ID T+AL++DP L  E L+D +PGPDFPTG ++LGR+G R+AYL GRGS+++R
Sbjct: 189 PHNLGEVIDATLALIEDPDLTSEQLIDYVPGPDFPTGGVMLGRSGARKAYLEGRGSVVIR 248

Query: 253 AKVAIEHIRKDREALIVTEIPYQVNKATMIEKIAELVRDKRVEGISEIRDESDRDGMRVV 312
           AK  +E IRKDR A++V EIPYQVNKA MIEKIAE VR+K++EG+S ++DESDR+G+RVV
Sbjct: 249 AKTRVEEIRKDRYAIVVEEIPYQVNKAAMIEKIAEQVREKKIEGVSHVQDESDRNGVRVV 308

Query: 313 IEIKRDAQADVVLNNLYRLTLLQTSFGVNMVALSGGKPGILTLHDVLTAFIAFREEVISR 372
           +E+KRDA A+VVLN LYR + +QT FG NM+AL+GG+P  LTL   LT+F+ FRE+VI+R
Sbjct: 309 VELKRDATAEVVLNQLYRFSPMQTHFGCNMLALNGGRPEQLTLRRFLTSFLDFREDVIAR 368

Query: 373 RTKFLLRKARDRAHVLVGLAIAVANIDEVIRLIRTAPDPATARESLMGRDWPAKDMAPLI 432
           RT + LRKAR+R+H+L GLA+AV+N+DEV+  IR + D A AR  LM R WPA D+AP I
Sbjct: 369 RTAYDLRKARERSHILCGLAVAVSNVDEVVATIRASADAAEARHKLMTRRWPAVDIAPYI 428

Query: 433 ALIADPRHKLKEDGTYRLSEVQARAILDLRLQRLTALGRDEIAEELDKLAAEIADYLEIL 492
            LI DP H + +DGTY LSEVQARAIL+LRLQRLT +G  E+ +EL++LA +I +YLEIL
Sbjct: 429 RLIDDPTHTMNDDGTYNLSEVQARAILELRLQRLTQIGVKEVTDELEELAGKIKEYLEIL 488

Query: 493 ASRPRMRAIIRDELLAIKAEFGTPRRTEIVEGFGDLEDEDLIQREEMVVTVSHAGYIKRV 552
           +SR R+  II DEL  ++  F  PRRTEIV+  GD+EDEDLI+RE+MVVT++  GYIKR 
Sbjct: 489 SSRERILGIISDELREVRDNFAVPRRTEIVDWSGDMEDEDLIEREDMVVTITSGGYIKRT 548

Query: 553 PLSTYRAQRRGGKGRSAMQTRDEDFVTRLFVASTHAPVLFFSSKGQVYKMKVWRLPLAAP 612
           PL  +RAQ+RGGKG S MQT++ED VT LFVA+TH  +LFF++ G VYK+K WRLP    
Sbjct: 549 PLVDFRAQKRGGKGLSGMQTKEEDVVTNLFVANTHTQLLFFTTDGMVYKLKTWRLPQGGR 608

Query: 613 QARGKALINILPLEQDERITSV--VLLPEDEGENQRLQIMFATTGGTVRRNALTDFQQVN 670
            ++GKA++NILP+     I ++  V +P+DE EN  LQ++FAT+GG VRRN L+DF  V 
Sbjct: 609 TSKGKAIVNILPIPPGVSIAAIMPVDVPDDEWEN--LQVVFATSGGDVRRNRLSDFTNVR 666

Query: 671 RNGKIAMKLAEGEAI--ADVGLCTEEDDVLLTTAAGACIRFPVTEVRLFKGRDSVGVRGI 728
           RNGKIAMKL E  ++   +  +C+E+DDV+L T +G  IRF  T+VR+F  R+S GVRGI
Sbjct: 667 RNGKIAMKLPEDGSVKLVNARICSEDDDVMLVTNSGRAIRFRSTDVRVFNSRESTGVRGI 726

Query: 729 RL-EESDSVISMAIIRHVEADAEQRLAYIKMRRALRGEAGESAEVEQEEGASGSGQLSQE 787
           RL  E D V+SM++IRH  A+  +R A+IK  R+  G  GE A  E E G    G LS+E
Sbjct: 727 RLVSEGDEVVSMSVIRHFSAEPWERNAFIKRFRSELG--GEVA--EDENGEESEGSLSEE 782

Query: 788 RYAEMGAKEQFILTVSENGYGKRTSSYEYRVTGRGGKGIVAMAVNERNGRLVASFPVEDA 847
           RY EM A    ++T++ +G G  TS+++YRV+GRGG+G+ AM    + G +VA+FPVE  
Sbjct: 783 RYQEMLAANDLLVTINRSGVGNLTSAHDYRVSGRGGQGVGAM----KGGAIVATFPVELE 838

Query: 848 DQIMLVTDGGQLIRCPVDGIRIVGRASQGVIVFDTAEGERVVSVEHISEDTGAEGEAGES 907
           DQIML T  GQ IRCPV+GI    R++ GV VF+TA+GE VVSV  I+E    + E   S
Sbjct: 839 DQIMLATSKGQSIRCPVNGISFRSRSAGGVRVFNTAKGEEVVSVAWIAERDDEDAEVPTS 898

Query: 908 -GVDAPGDDT 916
            G   P + T
Sbjct: 899 EGTSEPAETT 908