Pairwise Alignments

Query, 919 a.a., DNA gyrase subunit A from Xanthobacter sp. DMC5

Subject, 774 a.a., DNA topoisomerase IV subunit A from Burkholderia phytofirmans PsJN

 Score =  391 bits (1004), Expect = e-112
 Identities = 267/746 (35%), Positives = 395/746 (52%), Gaps = 75/746 (10%)

Query: 13  PPSDIRPVSITEELSRSYLDYAMSVIVARALPDVRDGLKPVHRRILFSMHENGYEWNKQY 72
           PP +   +++     R+YLDYA+SV+  RALPDV DG KPV RRILF+M++ G   N + 
Sbjct: 14  PPPEGDFLTLGNYAERAYLDYAVSVVKGRALPDVCDGQKPVQRRILFAMNDMGLSDNAKP 73

Query: 73  RKSARVVGDVIGKYHPHGDQSVYDALVRMAQTFAMRVPLVDGQGNFGSVDGDAPAAMRYT 132
            KSARVVGDV+GKYHPHGDQS YDALVR+AQ F+MR PL+DGQGNFGS DGD  AAMRYT
Sbjct: 74  VKSARVVGDVLGKYHPHGDQSAYDALVRLAQDFSMRYPLIDGQGNFGSRDGDGAAAMRYT 133

Query: 133 EVRLEKVTNTLLDDLDKETVDFQDNYDNSEHEPTVLPAKFPNLLVNGAGGIAVGMATNIP 192
           E RL  +   LLD++++ TVDF  NYD S  EP +LPA+ P +L+NGA GIAVG+AT IP
Sbjct: 134 EARLTPIAKLLLDEINQGTVDFMPNYDGSSEEPRLLPARLPFVLLNGASGIAVGLATEIP 193

Query: 193 PHNLGEIIDVTVALLDDPLLEPEALLDLLPGPDFPTGALILGRTG-IRQAYLTGRGSILM 251
            HNL E+   TVA++ +P +E   L+  + GPDFP GA I+     I  AY +GRGS+ +
Sbjct: 194 SHNLREVAAATVAMIRNPKIEHAELMQHIAGPDFPGGAQIISSDAEISAAYESGRGSLKV 253

Query: 252 RAKVAIEHIRKDREALIVTEIPYQVNKATMIEKIAELVRDKRVEG--------------- 296
           RA+  IE + + +  L++TE+P       ++E+I E    K   G               
Sbjct: 254 RARWKIEELARGQWQLVITELPPNTAAQKVLEEIEEQTNPKIKLGKKALTPEQLQTKQTM 313

Query: 297 ---ISEIRDESDRDG-MRVVIEIK--RDAQADVVLNNLYRLTLLQTSFGVNMVALSG-GK 349
              +  +RDES RD  +R+V E K  R  Q D V N L   T L+++  +NMV + G G+
Sbjct: 314 LALLDAVRDESGRDAPVRLVFEPKSSRIDQTDFV-NTLLAYTSLESNASLNMVMVGGDGR 372

Query: 350 PGILTLHDVLTAFIAFREEVISRRTKFLLRKARDRAHVLVGLAIAVANIDEVIRLIRTAP 409
           P    L ++L  +IAFR   ++RRT+  L K  DR H+L G  I   NIDEVIR+IR + 
Sbjct: 373 PRQKGLSEILHEWIAFRFATVTRRTRHRLSKVDDRIHILEGRMIVFLNIDEVIRIIRESD 432

Query: 410 DPATARESLMGRDWPAKDMAPLIALIADPRHKLKEDGTYRLSEVQARAILDLRLQRLTAL 469
           +P                    +AL+A           + LS+ QA  IL++RL++L  L
Sbjct: 433 EPK-------------------VALMA----------AFGLSDRQAEDILEIRLRQLARL 463

Query: 470 GRDEIAEELDKLAAEIADYLEILASRPRMRAIIRDELLAIKAEFGTPRRTEIVEGFGDLE 529
            + +I +EL +L  E A   E+L S   M+ ++  E+     ++G  RRT +++      
Sbjct: 464 EKIKIEKELAELRDEKAKLEELLGSESAMKRLLIKEIEGDAKQYGDERRT-LIQQEKRAT 522

Query: 530 DEDLIQREEMVVTVSHAGYIKRVPLSTYRAQRRGGKGRSAMQTRDEDFVTRLFVASTHAP 589
            E  +  E + V VS  G++        RA +  G   +    +  D +   F   T   
Sbjct: 523 FEARVVDEPVTVVVSQKGWV--------RALKGHGLDVAGFTFKAGDGLYAAFQCRTPDT 574

Query: 590 VLFFSSKGQVYKMKVWRLPLAAPQARGKALINILPLEQDERITSVVLLPEDEGENQRLQI 649
           ++ + S G+VY + V  LP    +  G  + +++ LE    +        ++       +
Sbjct: 575 LVAWGSNGRVYSVAVAMLP--GGRGDGVPVTSLIELESGSHLLHYYAASAEQA------L 626

Query: 650 MFATTGGTVRRNALTDFQQVNRNGKIAMKLAEGEA-IADVGLCTEEDDVLLTTAAGACIR 708
           + A++ G      + D     + GK  M +  G A +  + +  +   +   ++ G  + 
Sbjct: 627 LLASSNGFGFVAKVGDMVSRVKAGKSFMTIDAGAAPLKPMPMLPDATHIACLSSGGRLLV 686

Query: 709 FPVTEVRLFKGRDSVGVRGIRLEESD 734
           F + E++   G    G RG+ L   D
Sbjct: 687 FGIDEMKTLSG----GGRGVTLMALD 708



 Score = 29.6 bits (65), Expect = 8e-04
 Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 2/100 (2%)

Query: 796 EQFILTVSENGYGKRTSSYEYRVTGRGGKGIVAMAVNERNGRLVASFPVEDADQIMLVTD 855
           EQ +L  S NG+G      +     + GK  + +       + +   P  DA  I  ++ 
Sbjct: 623 EQALLLASSNGFGFVAKVGDMVSRVKAGKSFMTIDAGAAPLKPMPMLP--DATHIACLSS 680

Query: 856 GGQLIRCPVDGIRIVGRASQGVIVFDTAEGERVVSVEHIS 895
           GG+L+   +D ++ +    +GV +    + E +V    I+
Sbjct: 681 GGRLLVFGIDEMKTLSGGGRGVTLMALDDKETLVQALSIN 720