Pairwise Alignments

Query, 491 a.a., putative cyclic di-GMP phosphodiesterase PdeB from Xanthobacter sp. DMC5

Subject, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

 Score =  162 bits (409), Expect = 6e-44
 Identities = 92/239 (38%), Positives = 133/239 (55%), Gaps = 4/239 (1%)

Query: 243 TELAKALKKGELVAHYQPIIELATGRCIGAEALVRWPRADGSQTPPDMFIPLAEETGLIG 302
           T++  AL   E V  YQPI++L +G  +GAEAL RW   +    PP  FIP+AEE+GLI 
Sbjct: 596 TQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIAEESGLIN 655

Query: 303 RLTDQMLSAVIEDLGDLLRDDPHA---HVSINLSAVDITTGRILPVLERVLDGSGIQPRQ 359
            + +Q+L     D    + ++      H+ +NLS   ++    +  L  VLD SG+QP  
Sbjct: 656 AIGEQILRQACADTVRGIAENKWPSTFHMHVNLSVNQLSHPDFIAQLHSVLDESGLQPTN 715

Query: 360 IWLEATERSFIDVDGARA-TLLELRRRGHRTAIDDFGTGYSGLNYIQNLPIDLLKIDRSF 418
           + LE TE   +D D      +LEL++     AIDDFGTGYS L Y+  LP D LKIDR F
Sbjct: 716 LTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLKIDREF 775

Query: 419 ITAVNTEAPTRDVTPYIIAMGHELKLQIIAEGVETENQAEYLRTQGVSFAQGWLYSKAL 477
           ++ +N       V   I+ M    K++++AEG+ET+ Q + L   G    QG+L+SK +
Sbjct: 776 VSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGFLFSKPM 834