Pairwise Alignments

Query, 745 a.a., DNA topoisomerase 4 subunit A from Xanthobacter sp. DMC5

Subject, 931 a.a., DNA gyrase subunit A from Sinorhizobium meliloti 1021

 Score =  414 bits (1064), Expect = e-119
 Identities = 250/635 (39%), Positives = 368/635 (57%), Gaps = 54/635 (8%)

Query: 7   PPGDGNIEKVTLKEALEERYLAYALSTIMHRALPDARDGLKPVHRRILHAMRQLRLDPGQ 66
           PPG   IE +++ E ++  YL YA+S I+ RALPD RDGLKPVHRRIL+ M +L +D  +
Sbjct: 13  PPG---IEPISIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGMSELGIDWNK 69

Query: 67  GFKKSARVVGDVIGKFHPHGDQSVYDALVRLAQDFAQRYPLVDGQGNFGNVDGDNAAAMR 126
            + K ARV GDV+GK+HPHG+ ++YDAL R+AQD++ R PL+DGQGNFG+VDGD  AA R
Sbjct: 70  KYVKCARVTGDVMGKYHPHGNAAIYDALARMAQDWSLRLPLIDGQGNFGSVDGDPPAAER 129

Query: 127 YTEARLTETARLLLDGIDEDAVDFRPTYDGSEEEPAVLPAAFPNLLANGSQGIAVGMATS 186
           YTE RL + A  LLD +D+D VDFR  YDG+  EP V+PA FPNLL NG+ GIAVGMAT+
Sbjct: 130 YTECRLQKAAHSLLDDLDKDTVDFRDNYDGTLHEPVVVPAKFPNLLVNGAGGIAVGMATN 189

Query: 187 IPPHNAAELLDAALHLIDHPDALAFDLLKFVPGPDFPTGGVLVEDPVGVAEAYATGRGSF 246
           IPPHN  E++D  + LID+P     +L++ +PGPDFPT G L+    G+ +AY TGRGS 
Sbjct: 190 IPPHNLVEVIDGCIALIDNPAIELPELMQIIPGPDFPT-GALILGRSGIRQAYETGRGSV 248

Query: 247 RVRARWEKEDTGRGGYVVVVTEIPYGVAKSRLVEKIAELLTDKKLPLLADVRDES-AEDI 305
            +R R   E        +++TEIPY V K+ ++EK+AEL+ +K++  ++D+RDES  +  
Sbjct: 249 IMRGRAHIEPMRGDREQIIITEIPYQVNKATMIEKMAELVREKRIEGISDLRDESDRQGY 308

Query: 306 RLVLEPRTRTVDAEVLMESLFKLTELEARIPLNMNVLVKGQIPKVLSLAEALREWLDHRR 365
           R+V+E + R  +AEV++  L++ T L+     NM V + G  P+ ++L + LR ++  R 
Sbjct: 309 RVVIELK-RDANAEVILNQLYRYTPLQTSFGCNM-VALNGGKPEQMTLLDMLRAFVSFRE 366

Query: 366 DVLLRRSRYRLDQIAHRLEVLGGYLIAYLNLDEVIRIIREEDEPKVSLMQ---------- 415
           DV+ RR++Y L +   R  VL G  IA  N+DEVI++IR+  +P+ +  Q          
Sbjct: 367 DVVSRRTKYLLRKARERAHVLVGLAIAVANIDEVIKLIRQAPDPQTAREQLMERRWPAHD 426

Query: 416 -------------------TFELTDVQAEAILNMRLRSLRRLEEMEIRKEHDALSKEQDG 456
                              T+ L++ QA AIL++RL+ L  L   EI  E + + +E   
Sbjct: 427 VDALIRLIDDPRHRINDDATYNLSEEQARAILDLRLQRLTALGRDEIGDELNKIGEEIKD 486

Query: 457 LNRLVASETAQWKAISKEIRETRKTYGPETALGRRRTTFAAAPTVHEDAFTEALVEREPV 516
              +++S     + +  E+   R  +G       RRT  A      +D   E L+ +E +
Sbjct: 487 YLDILSSRLRIMQIVKNELTAVRDEFGTP-----RRTEIAEGGPDMDD---EDLIAQEDM 538

Query: 517 TVVVSAKGWI--------RALKGHVADVSNLQFKGDDSHGHAFFAETTSKVMVFASNGRF 568
            V VS  G+I        RA +      S +  + +D     F A T + V+ F+S G  
Sbjct: 539 VVTVSHLGYIKRVPLTTYRAQRRGGKGRSGMATRDEDFVTRLFVANTHTPVLFFSSRGIV 598

Query: 569 YTLDASKLPGG--RGHGEPVRLMIDLEQEAEIVSV 601
           Y     +LP G  +  G+ +  M+ LE    I ++
Sbjct: 599 YKEKVWRLPIGTPQSRGKALINMLPLEPGERITTI 633