Pairwise Alignments

Query, 598 a.a., Voltage-gated ClC-type chloride channel ClcB from Xanthobacter sp. DMC5

Subject, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (280), Expect = 3e-29
 Identities = 114/424 (26%), Positives = 188/424 (44%), Gaps = 57/424 (13%)

Query: 37  SLVLIAAIMGVLAGV-------AASIMSAT-TQWMHEVL-----YWLAPGERLSSSPALA 83
           S++ ++ ++G+LAG+       A  ++S T T W+   +      WLA    +S+  A  
Sbjct: 32  SVLFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLKSEIGSFLPLWLA-AFLISAFLAFI 90

Query: 84  SPWLI--LVPAVGGAAMGLIALALK-----RWRRHPFVDPIEANALHGGRMSLTDSIIVA 136
             +L+    P   G+ +  I  A+      RW R   V P++     GG  +L       
Sbjct: 91  GYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWR---VLPVK---FFGGMGAL------- 137

Query: 137 LQTMVSNGFGASLGLEAGYSQIGSGIASRLGLTFKLRRNDLR-ILVGAGAAAGIGAAFDA 195
                  G G  LG E    Q+G  +   +   F+++  D R  L+ AGAA G+ AAF+A
Sbjct: 138 -------GSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNA 190

Query: 196 PLMGAFYGFEIVIGS--YSIPAAAPVLAGTVSAVMTARLLGAHVEPLHMPL--DPNLGPV 251
           PL G  +  E +     Y++ +   V+   V+A +  R++      + MP    P L  +
Sbjct: 191 PLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTL 250

Query: 252 DILPILFLGLAAAAVAIVIMRLVTTVETLFGMSRIPAPLRPMVAGIGIGA----LALYSP 307
            +   L LG       ++   L+T  + LF         R ++ G  IG     L LY P
Sbjct: 251 GLF--LLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVP 308

Query: 308 QVLSDGHGALHTQVGSAVTASVAIV-FGLKILASALSIGSGFRGGLFFASLFLGALMGKL 366
           ++   G   + T       A + ++ F  +I  + L  GSG  GG+F   L LG L G  
Sbjct: 309 ELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYA 368

Query: 367 YGGLLALAFPGFHLDPSVAAVVGMGALAVGVIGGPLTMSFLVLEMTRDISLSGFVMAAAV 426
           +G +  + FP  +++P + A+ GMGAL    +  P+T   LV+EMT +  L    +   +
Sbjct: 369 FGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHL----ILPLI 424

Query: 427 VTSL 430
           +TSL
Sbjct: 425 ITSL 428