Pairwise Alignments

Query, 380 a.a., Putative transport protein YdiK from Xanthobacter sp. DMC5

Subject, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 30/365 (8%)

Query: 24  VLQLALRFGTLALLFGWCFTIVQPFLTSILWGLIIAIASHPLFIRLCAALNGRTATAATL 83
           VL +AL    LA     C+ +V+P++ SI+   II++   P+       L      AA L
Sbjct: 13  VLVVALLASALA-----CYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFL 67

Query: 84  FVVLALTLLVLPAMLLADTLVN-----SLKLLAHHMADGTLRLPPPPAAVRGWFLVGEPL 138
             V+   ++V+P + +   +V      S  L A     G   L   P  V+G  L    L
Sbjct: 68  SCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYL 127

Query: 139 YSFWMLASTNLDQAISSVA----SELTWAGKWMLGSATGVLLGILEFVVAIFVAAVLMAN 194
             F  ++   + Q I   A    S L      +LG AT     ++ F + +FV   L+ +
Sbjct: 128 -PFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSF---VMHFFLMLFVLFFLLRD 183

Query: 195 ATSGQRIAGDVVTRLAGSGGLGYADLAVRTIRSVSK----GIIGVALIQSLLAGLGFLAA 250
                +I   +   L  S      D  +  I +VSK    G    A+ Q +  G+G   A
Sbjct: 184 H---DKIISAIRHILPLSRS--QEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLA 238

Query: 251 DIPAAGLLALLCLIIAIVQLPLAIVLVPVAIYAFTLLDPMPAVIFAVW-CAGVSLIEHVL 309
             P      ++     I  +  A++ +P  +Y F   D   A+  A+W  A V  I+++L
Sbjct: 239 GFPGLFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLL 298

Query: 310 RPIMLGRGVDVPMLVVFIGAIGGLLSSGVLGLFVGPVVLALGYTLILHWLEAEPARALEV 369
           RP ++     +  L++F   +GG+   G++GL  GP++ A+  T++L  +  E  R+   
Sbjct: 299 RPFLMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAI--TMVLFNIYEEEFRSFLD 356

Query: 370 EERRT 374
           ++ R+
Sbjct: 357 QQDRS 361