Pairwise Alignments

Query, 258 a.a., D-aminoacyl-tRNA deacylase from Xanthobacter sp. DMC5

Subject, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

 Score =  195 bits (496), Expect = 7e-55
 Identities = 104/256 (40%), Positives = 151/256 (58%), Gaps = 6/256 (2%)

Query: 1   MLVDSHCHLD---FPDFAAELPDVVARAEAAGVSHLVTISTRVRRFNEIAAIAERFDSVS 57
           M VDSHCHLD   + D  A++ DV+ +A  A V +L+++   +  F ++ A+ E F  V 
Sbjct: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60

Query: 58  CSVGTHPHQAGEETDVTVKDLVDLSRHPKVVAIGEVGLDYHYDLGPREAQEHGFRTHIAA 117
            S G HP     ++D ++      ++HP+VVAIGE GLDYHY     + Q+  FR  I  
Sbjct: 61  ASCGVHPLDV--QSDFSLDLFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIET 118

Query: 118 SRETGLPLVIHAREADEDVAAILEEESARGAFPFLLHCFTAGPDLARRALALGGYISFSG 177
           +     PL+IH R A +D   +L E  A+     ++HCFT     A+ A+ LG YIS SG
Sbjct: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQQCGG-VIHCFTEDLAFAQAAMELGFYISISG 177

Query: 178 VVTFKKSEDLRAIACDVPADRILVETDSPFLAPTPHRGKRNEPSFVRETAKVLAEARGEP 237
           +VTF+++ DL+ +   +P DR+L+ETDSP+LAP PHRGK N+P++V E A  +A  +G  
Sbjct: 178 IVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVS 237

Query: 238 FETFAAATTRNFYTLF 253
               A  TT+NF  LF
Sbjct: 238 LTEVAQKTTQNFQNLF 253