Pairwise Alignments

Query, 258 a.a., D-aminoacyl-tRNA deacylase from Xanthobacter sp. DMC5

Subject, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

 Score =  100 bits (249), Expect = 3e-26
 Identities = 68/237 (28%), Positives = 124/237 (52%), Gaps = 14/237 (5%)

Query: 3   VDSHCHLDFPDFAAELPDVVARAEAAGVSHLVTISTRVRRFNEIAAIAERFDSVSCSVGT 62
           +DSHCH++         D+V RA    V  +VT  T +        + E++  +  ++G 
Sbjct: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKVQ-MVTSGTNLGSCRRAVELKEKY-GIYVTLGY 66

Query: 63  HPHQAGEETDVTVKDLVDL-SRHPKVVAIGEVGLDYHYDLGPREAQEHGFRTHIAASRET 121
           HP +   + +   K    + S+  +++A+GE+GLD+  D    E QE+ F+  I  S+E 
Sbjct: 67  HPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDF--DAENIERQENIFKKFINLSKEV 124

Query: 122 GLPLVIHAREADEDVAAILEEESARGAFPFLLHCFTAGPDLARRALALGGYISFSGVVTF 181
             P+VIHAR  +E    IL+ +        + HC++   +LA+  +  G +IS+S +V F
Sbjct: 125 NKPVVIHARGMEERSYDILKNDVIS-----MYHCYSGSLELAKELIKNGNFISYSTLVCF 179

Query: 182 KKSEDLRAIACDVPADRILVETDSPFLAPTPHRGKRNEPSFVRETAKVLAEARGEPF 238
             SE  + +  ++  + ++VETDSP+L+P   +G++NEP  V    + + E + + +
Sbjct: 180 --SEHHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIETIWELKKDEY 232