Pairwise Alignments

Query, 343 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 341 a.a., DNA polymerase III, delta'' subunit from Dechlorosoma suillum PS

 Score = 77.8 bits (190), Expect = 4e-19
 Identities = 90/314 (28%), Positives = 134/314 (42%), Gaps = 30/314 (9%)

Query: 37  RAGRLPHALLIGGPEGIGKATLAYRLARVVLAGGPEPGAHDLSLSPS--------HPVFR 88
           R  +LPHALL+ G  G+GK  LA   A  +L   P    H      +        HP FR
Sbjct: 17  RRAQLPHALLLIGQRGVGKFELARAFAAGLLCEAPGMDGHACGQCSACNWLGQGNHPDFR 76

Query: 89  --QVASMSHPDMLVLRRAPEAGEEKIPTIIPAEMVRRVRSFFGATAAAGGWRVCIVDAVD 146
             Q A+MS  +        E G++K    I  + VR +  F        G R+ ++   +
Sbjct: 77  LVQPAAMSDEEA---EADEETGKKKPSQQITIDQVRGLDDFLHVGTHRQGVRIVLLHPAE 133

Query: 147 ELNAFGANALLKTLEEPPPRALFLLITHAPGKVLATIRSRSRLLRLRALGEGDVLAALDH 206
            +N   ANALLK+LEEP P  LFLL++    ++L TIRSR + + +         A L  
Sbjct: 134 AMNRNTANALLKSLEEPRPDTLFLLVSSEADRLLPTIRSRCQTVEVPLPSPQAATAWLAA 193

Query: 207 LSTEIGDLNAAELPAAAQASGGSVRRALTLARGEGMEVRLATLKALDQLPRPRPEDLHA- 265
                G    A        +GG+ R A  LA G G    L  L  L QL + R  D  A 
Sbjct: 194 QKVSDGGRWLA-------LAGGAPRLAAELA-GSGQRSLLDAL--LGQLQKGRQLDPIAA 243

Query: 266 ---LGTRLQGDRADGLDL--FVEAVSDYVAAQATHAD-VPRHRLVRLGEVWEKVRRSATE 319
              +   L+ D++  L +   VE +  + A  A  A+ +P       G    ++  S++ 
Sbjct: 244 AALIEKTLKADKSGALTMKRTVEWLQKWSADLALVAEGLPPRYFQDDGATIGQLAASSST 303

Query: 320 ADVFNLDRKALVFR 333
             + N +R  + F+
Sbjct: 304 IKIINFNRLLIKFK 317