Pairwise Alignments

Query, 260 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 262 a.a., high-affinity branched-chain amino acid ABC transporter, ATP binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  167 bits (424), Expect = 2e-46
 Identities = 103/258 (39%), Positives = 142/258 (55%), Gaps = 12/258 (4%)

Query: 1   MSPLLEVKDLMKSYGGVHAVRGVSFTVEAGQMLALIGPNGAGKSTCFNMLNGQIPPDAGT 60
           M  +L+V+ + K++GG+ A+  V   V+AG+++ALIGPNGAGK+T FN + G   P  G 
Sbjct: 1   MQTVLDVRSISKNFGGLRALNEVDLRVDAGEIVALIGPNGAGKTTFFNCITGIYVPTEGE 60

Query: 61  VRI-----EGKDIKGLPPRAVWRLGVGRTFQITATFASMTVRENVQVALI--SFHGLISR 113
           V +     E   + G  P  V  LG+ RTFQ    F +MTV ENV +     +  G++  
Sbjct: 61  VVVTRPGSEPVRVNGQKPNQVTELGMARTFQNIRLFQNMTVLENVMIGCHCRTRSGILGA 120

Query: 114 VFGFAGAACREE-----ADALLALVGLTTQAQRPCGELAYGDLKRLELAVALANQPRLLL 168
           +   A     E+     +  LL  V L    +     L YG  +RLE+A ALA  P LLL
Sbjct: 121 LLRDAKTRGEEQEIIDKSYELLKSVHLQQHYKEQARNLPYGAQRRLEIARALATNPFLLL 180

Query: 169 MDEPTAGMAPRERVELMRLTAEIARAKGIGVLFTEHDMDVVFEHADEVMVLNRGQLIARG 228
           +DEP AGM P+E +EL  L  EI     + VL  EHDM++V   +D + V+  G  IA G
Sbjct: 181 LDEPAAGMNPQETLELKGLVLEIRERLNLSVLLIEHDMNMVMSLSDRIYVMEYGSKIAEG 240

Query: 229 TPAEVRRDPQVRAIYLGE 246
           TP EV R+P+V   YLGE
Sbjct: 241 TPEEVSRNPRVIKAYLGE 258