Pairwise Alignments

Query, 398 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 378 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 73.9 bits (180), Expect = 7e-18
 Identities = 80/343 (23%), Positives = 145/343 (42%), Gaps = 20/343 (5%)

Query: 11  ALLLAAGGARAQQGEIKVGEINSYS-ALPAFLDPYRKGMDLALKEVNDAGGIKGKKLVII 69
           A+  A G +   Q ++K G     + A  AF + Y KG   A   +N AGG+ G+K+V++
Sbjct: 14  AVAAALGVSAFAQADVKFGVAGPMTGANAAFGEQYMKGAQAAADAINKAGGVNGEKIVLV 73

Query: 70  SKDDGGKPADALTAANELVSRDGVVMIAGGFLSNVGLALADFAKQKQVMYLAAEPLTDAL 129
           + DD  +P  A+  AN LV +D V+ + G F S+  +  ++   +  ++ +     T+  
Sbjct: 74  AGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGIIAITPGS-TNPQ 132

Query: 130 VWSKGNDYTFRLRTSNYMQAAMLAEEAAK-LPAKRWATIAPNYEFGQSFVAVFKELLKKR 188
           V  +G    FR+   +  Q  +  +     L  K+ A +     +GQ      K  L KR
Sbjct: 133 VTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGLADATKAQLAKR 192

Query: 189 KPDVEFVAEQWPPLNKIDAGPVLQAIDAANPEAILNATF---AGDLVKLVREGNTRGIFK 245
              V+ V  +     + D   V+  I AA  + +        AG LV+ +RE   +    
Sbjct: 193 --GVKEVLYEGLTRGEKDFSAVVTKIRAAGADVVYFGGLHPEAGPLVRQLREQGLKD--- 247

Query: 246 NRVVVSYLTGEPEYLDPLKTETPEGWIVTG-YPWYGIK---TAEHQAFLDAYQQLHKDYP 301
               V +++ +    D L T       V G Y  +G       + +A ++ +++ +   P
Sbjct: 248 ----VKFMSDDGIVTDELVTTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRK-NGTEP 302

Query: 302 RLGSIVGYSTVKSIAAALKATDDYSTAGLVKAMKNLKVSTPFG 344
              ++  Y++V+++AA              K +K   V T  G
Sbjct: 303 EGYTLYAYASVQALAAGFNGAKSNKGEDAAKWLKANPVQTVMG 345