Pairwise Alignments

Query, 735 a.a., Heme/hemopexin utilization protein C from Xanthobacter sp. DMC5

Subject, 784 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

 Score = 63.5 bits (153), Expect = 4e-14
 Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 25/178 (14%)

Query: 29  LCAVLMATPVRAQSAPDAGPTDDTTAISLDTITVAASLTEERAIDALAAISVVRPDDLEQ 88
           L  V++++ V+AQ   +    D+T  +   +I     LT++R              DL++
Sbjct: 43  LLPVVLSSVVQAQENTEQA-VDETVTVHGQSI-----LTDQRT-----------RSDLDK 85

Query: 89  LMPSRTQDVFFGMPGTTVIQNGNSTQAS---INIRGMEDYGRVAVFIDGARQN-FTQLGH 144
           +      D+F G+  T+V  N    +A    I IRG++  GRV +FIDG+ Q+  T  G+
Sbjct: 86  VRGIANADIFSGI--TSVQSNNMHNEAGALDIGIRGVQGEGRVPIFIDGSLQSTHTSRGY 143

Query: 145 GTGAGSFFLEPGLLADVDVVRGPV--ANIYGSGAIGGVVTFRTKDANDIIKPGQTWGV 200
              +   +++  LL+ + V +G    ++ Y SGA+GGVV   T    DIIK  Q +GV
Sbjct: 144 QGVSDRTYIDTDLLSSLTVNKGATIESSPYASGAVGGVVNATTLGIKDIIKDDQAFGV 201



 Score = 51.6 bits (122), Expect = 2e-10
 Identities = 54/270 (20%), Positives = 108/270 (40%), Gaps = 34/270 (12%)

Query: 480 YRAPAVTETLVNGAHPPNIPLVFCPDGSYGVFCFVPNPYLKPEIGKNKEIGLNLRFDDIF 539
           Y     T+  +  +    +P ++    S  VF + P   +KPE   N E+G+     +  
Sbjct: 515 YALTPSTQLFLKSSRTYRMPSLYETTLSNEVFSYNPYNPIKPEQAWNNEVGVQFMASNSV 574

Query: 540 TKGDKFRAKANVYQNDVEDYIELIGYDKTPFGT--YANYQYQNIANARLRGFEFESNYDA 597
            + D+     + ++N ++D+I      KTP  +   AN+ + N    +L G+E  ++Y  
Sbjct: 575 LQDDRLNLSVSYFRNSIKDFISGGRLAKTPGMSEWQANFTFTNYDKLQLSGWELGAHYQY 634

Query: 598 GVWFAGFNATV--------------SEGENTNN-----GQPLANVMP-NTIATTLGARFF 637
              +  F AT+              +E +  N+     G     + P   +   +G +FF
Sbjct: 635 AWLYTHFAATLYSETKICSVQQAQYAESDTCNSLGFAWGLTPTRIPPKQNLYLNVGTKFF 694

Query: 638 ENKLTVSVRWQWVAAKTAADLPAD-------SPYEPTPSFNLVNVYLGYQPDPNVLAQLS 690
            + L   V+  + + K+    P+D       +P    PS   +++Y  Y+ + N     +
Sbjct: 695 NDTLDSGVKVSYHSGKSN---PSDWLAGTAANPILEIPSDYTIDLYSQYELNANTQLFFA 751

Query: 691 VENLFNEQYVQYQQF--LPSAGITAKAGLK 718
           + N+ +   V+      +P  G T   G +
Sbjct: 752 INNVTDRYQVRPGSVVSMPDPGRTITLGFE 781