Pairwise Alignments

Query, 392 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 625 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  107 bits (268), Expect = 7e-28
 Identities = 70/170 (41%), Positives = 102/170 (60%), Gaps = 7/170 (4%)

Query: 213 ELVRETLEVADTDALSGLLNRRGFEQRA-SDLVHGRTGAAPFALLLIDIDHFKAINDTFG 271
           E+ ++  E +  D+L+G+ NR  F++R  ++    R    P ALL++DID FK+IND FG
Sbjct: 445 EVNQKLTEQSTIDSLTGVKNRSAFDKRLLAESRISRRQETPIALLMLDIDRFKSINDQFG 504

Query: 272 HGVGDQTIRGFGDML-QHTLPQSALIGRVGGEEFAILLERASPEMARLQAESVR--LAII 328
           H  GDQ ++     L QH    + L+ R GGEEFAI+L   + + A   AES+R  ++ I
Sbjct: 505 HLAGDQALKLIAQTLQQHLKRPTDLVSRFGGEEFAIILPNTTADGALQVAESIRDTVSCI 564

Query: 329 GHDDQDVP-PFTVSIGVA--LASRDEPLLATLERADAALYEAKRSGRNRV 375
           G   +  P P TVSIGV+  +   ++     LE+AD ALY+AK SGRN+V
Sbjct: 565 GLTWEGKPIPLTVSIGVSADVIMNEQHSTELLEQADKALYQAKNSGRNQV 614