Pairwise Alignments

Query, 424 a.a., Cytochrome b/c1 from Xanthobacter sp. DMC5

Subject, 421 a.a., cytochrome b from Vibrio cholerae E7946 ATCC 55056

 Score =  375 bits (964), Expect = e-108
 Identities = 190/414 (45%), Positives = 260/414 (62%), Gaps = 31/414 (7%)

Query: 16  WFESRLPIVGLIHSSAIAYPVPKNLNYMWTFGAILSFMLVCQIVSGVVLAMHYVAYAPVS 75
           W E RLP +         YP+PKN N+ + FG++   +LV Q+++G+ L M+YV     +
Sbjct: 7   WVEKRLPAMNAYKKHLSEYPMPKNFNFWYLFGSLAMLVLVNQLLTGIWLTMNYVPSGEGA 66

Query: 76  FARVEHIMRDVNYGWLIRYIHANGASMFFIAVYIHIFRGMYYGSYKAPREVLWILGVIIY 135
           FA +E+IMRDV YGWL+RY+H+ GAS FF+ VY+H+FRG+ YGSY+ PRE+LWI G++I+
Sbjct: 67  FASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWIFGMLIF 126

Query: 136 LLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPWVGTTIVEWLWGGYSVGDPTLNRFFS 195
           L++MA AFMGY+LPWGQMS+WGA VI +LF AIP +G  +  W+ G Y +   TLNRFF+
Sbjct: 127 LVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGATLNRFFA 186

Query: 196 LHYL-LPFMIAGVVGLHIWALHHVGQNNPDGVDIKNVAK--------------------- 233
           LH + LP ++  ++ LHI ALH VG NNPDG++ K + K                     
Sbjct: 187 LHVIALPIVLLLLIVLHILALHEVGSNNPDGIETK-LPKGSMGEGYESQFKFHEYYTKKY 245

Query: 234 ---DSVPFTPYATIKDIFAMVVFLIFFSWFIFYIP---NYLGHSDNYIPANPLSTPAHIV 287
              DS+PF PY T+KD+  +  FL  F + +F+ P    Y     N+  ANPL TP HI 
Sbjct: 246 DIIDSIPFHPYGTVKDLIGVAGFLFLFCYVLFFNPEMGGYFLEPPNFEAANPLKTPEHIA 305

Query: 288 PEWYFLPFYAILRSIPDKLGGVLAMFAAIAVLAFLPWLDTSKVRSAKYRPLFRQF-FWVF 346
           P WYF PFYAILR++PDKL GV+AM A+I VL  LPWLD  KVRS +YR  F  F    F
Sbjct: 306 PVWYFTPFYAILRAVPDKLLGVIAMGASIVVLFLLPWLDRCKVRSYRYRSKFHLFNIAQF 365

Query: 347 AVVAVLLGYMGSQPAEGGALIISRILTAYYFIHFLVILPLLGLFERPKPVPASI 400
            V  + LG +G+ PA     ++++I +  YF+ F V+L      E  KP+P  +
Sbjct: 366 TVSFIALGILGALPATPTYTLLAQIFSLCYFM-FFVLLFFYSKNEATKPLPTRV 418