Pairwise Alignments

Query, 433 a.a., DNA polymerase IV from Xanthobacter sp. DMC5

Subject, 418 a.a., DNA-repair protein (RefSeq) from Shewanella sp. ANA-3

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 80/287 (27%), Positives = 116/287 (40%), Gaps = 18/287 (6%)

Query: 45  AHVDCDAFYAAVEKRDNPDLAHVPLIIGGGKRGVVSTACYIARIHGVRSAMPMFKALALC 104
           A VD ++FY + E+   PD    P+I+     G +  A   AR  G+    P F     C
Sbjct: 3   ALVDANSFYCSAEQVFRPDWRGKPIIVLSNNDGCIVAANRQARELGIPKFAPYFHVKEQC 62

Query: 105 P--DAVVLKPNMEKYVKVGREVRARMKALTPLVEPLSIDEAFLDLSGTEALHQASPARTL 162
                +V   N E Y  +  ++   +    P     SIDE+FL     +  H + P    
Sbjct: 63  AKLGVIVCSSNYELYADLSAKMMEIIGRFAPDQHIYSIDESFLSF---KHCHTSIPCLKT 119

Query: 163 --ARFARDVEREVGITVSVGLAANKFLAKIASDLDKP----RGFSVI-GQSEAAEFLAPR 215
              R  + V +E  I V VG+ A   LAKIA+   K      G  +I  + +  E L   
Sbjct: 120 HGLRIRQTVWKEARIPVCVGIGATLTLAKIANHAAKKLPGYHGVCLIDNEPQRIEILKQL 179

Query: 216 PVTFIWGVGAAFGGKLARDGFSTIGDLQRAEPADLARR-YGAEGLRLSRLAFGLDTRKVE 274
            V+ +WG+G     KL   G  T  DL +  P  LAR+ +  E  R  R   G   ++ +
Sbjct: 180 LVSDVWGIGRRLSKKLVSMGIHTAYDLAQM-PTGLARKQFSIEIERTVRELNGTACKQWD 238

Query: 275 PEREAKSVSAETTFDRDIG-ALRPLEQTLYALSEEVSERLKRAGIAG 320
             R  K     T   R +G  +   E  L ALS+ V     +A   G
Sbjct: 239 HTRADKQQIFST---RSVGERIMDFEALLQALSKHVGIAAAKARAQG 282