Pairwise Alignments

Query, 345 a.a., L-carnitine dehydrogenase from Xanthobacter sp. DMC5

Subject, 708 a.a., 3-hydroxyacyl-CoA dehydrogenase, NAD-binding (RefSeq) from Shewanella loihica PV-4

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 5/219 (2%)

Query: 8   IRRVAVIGAGTIGASWAALFLSRGLEVVVSDPAPGAREATQALISGAWPVLTQLG--GEG 65
           IR+VAVIG+GT+G   A  F++ G+   + D    A E    +I   +    + G   + 
Sbjct: 299 IRKVAVIGSGTMGGGIAMNFINVGIPTQILDLNGEALERGLGVIRKNYEYTLKKGKLSQA 358

Query: 66  WIDPT-AWRFEPDPVAAVEGADFVQENAPERYEVKQKLFPALDAVLPPEVVIASSSSGLL 124
            +D   A        A +   D V E   E+ E+K+++F  LDA   P  ++A+++S L 
Sbjct: 359 QLDERMALLSGTTDYADIADVDLVIEAVFEKMEIKKQVFKTLDATCKPGAILATNTSTLD 418

Query: 125 ASRISEGCRHRERCLIGHPFNPPHLIPLVEVVGGAHASRDAIARAMAFYRWLGKHPIEIR 184
              I+      +  L  H F+P +++ L+E+V     + DA+   +   + + K P+ + 
Sbjct: 419 VDEIAAETSRPQDVLGLHFFSPANVMRLLEIVRANKTAPDALLTTVQLAQRIKKVPV-VS 477

Query: 185 KEVPGHVANRLQAALWREAIHLVAEGVASVEDVDAAVSE 223
               G + NR   +  RE++ L+ EG AS   +D   +E
Sbjct: 478 GVCWGFIGNRATDSYLRESMSLILEG-ASPAQIDKVHTE 515