Pairwise Alignments

Query, 337 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (254), Expect = 1e-26
 Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 25/312 (8%)

Query: 34  VFAACLVSLALHALAE---PFAKWTRFPERYAVIPVGIIVFGGLGLSLYLFG--STIQTQ 88
           + A  LV++ L  L E      +  R P   AVI V I VF GL + L +FG   TI  Q
Sbjct: 38  LIAPLLVAIVLAYLLEWPVTQLRRLRIPRTLAVIIV-ITVFTGL-MILAVFGLVPTIWKQ 95

Query: 89  VTQLVNELPTAWSA-----------FEQRFHLEGMSDDLLKRAEAAAPSGETVLSFVQGF 137
           V  L+N++P  ++            + +  HLE +   +          GE+V   V+G 
Sbjct: 96  VGNLINDVPNMYNGTQKFITSLPERYPELAHLEIVESVIGNAKNKVLGMGESV---VKGS 152

Query: 138 TSNLFQVV-LGTFLVVVGG-IYFAVSPELYRRMFLSLWRPSERPAAARRLAMVSEDLRHF 195
            ++L  +  LG +L++V   ++F +  +       S   P  R  A +    +++ + ++
Sbjct: 153 LASLVSLATLGVYLILVPLLVFFLLKDKQEMLRMASGILPRNRKLANKVWEEMNQQISNY 212

Query: 196 LKAQLIAMVVVGVLTFIGLTVVGVPSSLALALFAGLAEFVPMIGPVMAAAPAVLIALTM- 254
           ++ +++ +V+VG +++I   ++ +  S+ LA+  GL+  +P IG      P  ++AL   
Sbjct: 213 IRGKVLEIVIVGTVSYITFAILDLRYSVLLAVAVGLSVLIPYIGAAAVTVPVAIVALFQW 272

Query: 255 GADTGLWTLLVFVGVQQA-ESNIITPLLQQRMVSLPPAVTLFAVVAFGSIFGALGVVLAT 313
           G     +TLL+  G+ QA + N++ P+L    V+L P   + AV+ FG ++G  GV  A 
Sbjct: 273 GLTPQFYTLLIAYGIIQALDGNVLVPVLFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAI 332

Query: 314 PLTVVAFAAFKA 325
           PL  +  A +KA
Sbjct: 333 PLATLVKAVWKA 344