Pairwise Alignments

Query, 165 a.a., Transcription antitermination protein NusB from Xanthobacter sp. DMC5

Subject, 165 a.a., Antitermination protein NusB from Pseudomonas syringae pv. syringae B728a

 Score = 70.9 bits (172), Expect = 1e-17
 Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 11/158 (6%)

Query: 7   SQAEKTAPQKPMKKSAARLGAVQALYQMDMAATPLNDVLAEFESHWLGQEVEGIEFPEAD 66
           +++ + A  K  K+  AR  A QALYQ  MA   LN++ A+F        V+  +F   D
Sbjct: 14  AKSPEIAKGKSAKRREARQMATQALYQRHMAGHALNEIEAQF-------RVDN-DFSNVD 65

Query: 67  RRLFRSVVEGVLNAQRQIDPLVDGTLSKGWPLKRVEAVLRAVLRAGAFELMAK-DPPARV 125
              FR ++ GV   Q +ID  +   L     ++ ++ +  A+LR   FEL+ + D P RV
Sbjct: 66  GTYFRELLHGVATNQTEIDTALKPCLD--LTIEELDPIELAILRLSTFELLKRIDVPYRV 123

Query: 126 VITEYVNVAGAFLDRDETGMVNAVLDALAHELRPDEFR 163
           VI E + +A  +   D    VN VLD LA  LR  E +
Sbjct: 124 VINEGIELAKVYGSTDGHKFVNGVLDKLAPRLREVEVK 161