Pairwise Alignments

Query, 369 a.a., Protein-export membrane protein SecF from Xanthobacter sp. DMC5

Subject, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 6/199 (3%)

Query: 94  RIGAFGTTDEAQQAILAKVQGVLGTDYSVRRVETVGPSVSGELVRQSILALVLGAVAVLG 153
           RI   G+ +EAQQ  L    G L    ++    T+G S+  E +     AL LG    L 
Sbjct: 404 RITGAGSMEEAQQLALLLRAGSLTAPVTIVEERTIGASLGEENIANGFAALALGMAMTLT 463

Query: 154 Y--LWFRFEWQFAVGAIVTTMHDIFVTLMIYSAFGIDFDLTSIAAILTIMGYSLNDTVVV 211
           +  LW+R     A  A++  M  +   + +    G    L  IA ++  +G +++  V++
Sbjct: 464 FMALWYRRLGWVANVALLVNMACLLGLIALLP--GAVLTLPGIAGLVLTVGMAVDTNVLI 521

Query: 212 YDRIREMLRRYKKLPLPELLDIAVNATFSRTIIVSTTTFFATLALYFFGGEVLRGFSLAM 271
           ++RIR+ L   +     + +D   ++ FS  +  + TT    + LY  G   ++GF+L +
Sbjct: 522 FERIRDKLSEGRN--FAQAIDTGFDSAFSTILDANITTMITAVILYSIGNGPIQGFALTL 579

Query: 272 TVGVVIGTYSTIFVAAPIL 290
            +G++   +S +F +  ++
Sbjct: 580 GLGLLTSMFSGVFASRALI 598