Pairwise Alignments

Query, 369 a.a., Protein-export membrane protein SecF from Xanthobacter sp. DMC5

Subject, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

 Score =  219 bits (558), Expect = 8e-62
 Identities = 122/320 (38%), Positives = 189/320 (59%), Gaps = 10/320 (3%)

Query: 3   LIDYIPAQTNIHFMRLRHWTFPFSAALSIVACLLFAIHGFNLGIDFKGGTLIEAQTSQQQ 62
           +   + A   I FMR   + F  S  +   +    +    N G+DF GGTLIE    +Q 
Sbjct: 1   MFQILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGF-EQP 59

Query: 63  ADIGALREHLTDLDVGDVQIQEFGSPRDVLIRIGAFGTTDEAQQA----ILAKVQGVLGT 118
           A++  +R  L     GD  +Q FGS RDV++R+      D A +A    ILA ++   G 
Sbjct: 60  ANLEQIRSALEAKGFGDATVQNFGSARDVMVRLRP--RDDMAGEALGNQILAAIKEGTGG 117

Query: 119 DYSVRRVETVGPSVSGELVRQSILALVLGAVAVLGYLWFRFEWQFAVGAIVTTMHDIFVT 178
           +  +RR+E VGP+V  EL     LA+++  + +L Y+  RFEW+ A GA++   HD+ +T
Sbjct: 118 NVEMRRIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIIT 177

Query: 179 LMIYSAFGIDFDLTSIAAILTIMGYSLNDTVVVYDRIREMLRRYKKLPLPELLDIAVNAT 238
           L I+S   I+ DLT +AA+LT++GYSLNDT+VV+DRIRE  R+ +K    E+++ ++  T
Sbjct: 178 LGIFSILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQT 237

Query: 239 FSRTIIVSTTTFFATLALYFFGGEVLRGFSLAMTVGVVIGTYSTIFVAAPILIHLGLRAS 298
            SRT+I S TT F  +AL+  GG ++ GF+LA+ +G+ +GTYS+I+VA+ + + LG+   
Sbjct: 238 LSRTLITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITRE 297

Query: 299 TVSLPTKDAADPEVKELDEL 318
            +  P     + E  ELDE+
Sbjct: 298 HLLPP---QVEKEGAELDEM 314