Pairwise Alignments

Query, 369 a.a., Protein-export membrane protein SecF from Xanthobacter sp. DMC5

Subject, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 10/214 (4%)

Query: 94  RIGAFGTTDEAQQAILAKVQGVLGTDYSVRRVETVGPSVSGELVRQSILALVLGAVAVLG 153
           RI    +  EA    L    G L    S+    T+GPS+  + +   I A + G VAV+ 
Sbjct: 409 RITGIDSPAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGIQACIWGMVAVML 468

Query: 154 Y--LWFRFEWQFAVGAIVTTMHDIFVTLMIYSAF-GIDFDLTSIAAILTIMGYSLNDTVV 210
           +  L++R   +F + A +  M ++ + + + S   G    L  IA I+  +G +++  V+
Sbjct: 469 FTVLYYR---KFGMIANIALMANLVLIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVL 525

Query: 211 VYDRIREMLRRYKKLPLPELLDIAVNATFSRTIIVSTTTFFATLALYFFGGEVLRGFSLA 270
           +++RIRE LR  K  P   +     NA FS     + TT    + L+  G   ++GF++ 
Sbjct: 526 IFERIREELREGKN-PQQAIHQGYANA-FSTIADANITTLITAIILFAVGTGAIKGFAVT 583

Query: 271 MTVGVVIGTYSTIFVAAPI--LIHLGLRASTVSL 302
           +++G++   ++ I     I  L++ G R + +S+
Sbjct: 584 LSIGILTSMFTAIVGTRCIVNLLYGGKRINKLSI 617