Pairwise Alignments

Query, 369 a.a., Protein-export membrane protein SecF from Xanthobacter sp. DMC5

Subject, 294 a.a., preprotein translocase subunit SecF (RefSeq) from Shewanella sp. ANA-3

 Score =  173 bits (438), Expect = 6e-48
 Identities = 103/285 (36%), Positives = 159/285 (55%), Gaps = 8/285 (2%)

Query: 12  NIHFMRLRHWTFPFSAALSIVACLLFAIHGFNLGIDFKGGTLIEAQTSQQQADIGALREH 71
           NI+  + R+ +   S  L + +  +  + GFN G+DF GG + E Q  ++      L+  
Sbjct: 3   NINLTKWRYVSSAISIFLMLASLTIIGMKGFNWGLDFTGGVVTEVQLDRRITS-SELQPL 61

Query: 72  LTDLDVGDVQIQEFGSPRDVLIRIGAFGTTDEAQQAI-LAKVQGVLGTDYSVRRVETVGP 130
           L      +V +     P   ++R       D AQ  + +A+    LG +  V     VGP
Sbjct: 62  LNAAYQQEVTVISASEPGRWVLRYA-----DTAQSNVDIAQTLAPLG-EVQVLNTSIVGP 115

Query: 131 SVSGELVRQSILALVLGAVAVLGYLWFRFEWQFAVGAIVTTMHDIFVTLMIYSAFGIDFD 190
            V  EL  Q  LAL++  + +LGYL +RFEW+ A GA+   +HD+   L  +S   ++F+
Sbjct: 116 QVGKELAEQGGLALLVAMLCILGYLSYRFEWRLASGALFALVHDVIFVLAFFSLTQMEFN 175

Query: 191 LTSIAAILTIMGYSLNDTVVVYDRIREMLRRYKKLPLPELLDIAVNATFSRTIIVSTTTF 250
           LT +AA+L I+GYSLND++++ DRIRE+L    KL + E+ + A+ ATFSRT++ S TT 
Sbjct: 176 LTVLAAVLAILGYSLNDSIIIADRIRELLIAKPKLAIQEINNQAIVATFSRTMVTSGTTL 235

Query: 251 FATLALYFFGGEVLRGFSLAMTVGVVIGTYSTIFVAAPILIHLGL 295
               AL+  GG  L GFS+AM +G++ GT+S+I V   +   LGL
Sbjct: 236 MTVGALWIMGGGPLEGFSIAMFIGILTGTFSSISVGTSLPEFLGL 280