Pairwise Alignments

Query, 494 a.a., Serine--tRNA ligase from Xanthobacter sp. DMC5

Subject, 435 a.a., serine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  396 bits (1018), Expect = e-115
 Identities = 224/487 (45%), Positives = 285/487 (58%), Gaps = 56/487 (11%)

Query: 1   MHDIKWIRDEPAGLIDALARRGNRSDEAKAAAEALVAKLLDLDTRRRETLTKLETLLARR 60
           M D K +R E       LARRG + D         V  +  L+ +R+    ++E L + R
Sbjct: 1   MLDSKLLRTELDETAAKLARRGFKLD---------VETIRTLEEQRKSIQVEVENLQSTR 51

Query: 61  NAASKEIGQAKAKKDEATASALMAEVAKLKEDVPALEAEAKRIEVELNGELAAIPNAPLA 120
           N+ SK+IGQ  A  D+A A A+  ++  L +D+ A + E   +  +L+     +PN P  
Sbjct: 52  NSISKQIGQLMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDD 111

Query: 121 EVPEGADEHDNVEKSRFGAPRTYSFTPKQHFEVGEGLGQMDFETAAKLSGARFVVNKGPL 180
            VP G D+ +NVE SR+G P+TY F  K H ++GE    +DF +A K++GARFVV KG  
Sbjct: 112 AVPNGKDDSENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQF 171

Query: 181 ARLERALGQFFLDVHTGEHGYMEVNPPILVRDEAMFGTAQLPKFKDDQFSAISQEIIALN 240
           ARL RA+ QF LD+HT +HGY E+  P LV  E +FGT QLPKF  D F           
Sbjct: 172 ARLHRAIAQFMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHT--------- 222

Query: 241 EYDVVIDEPGKPSIVFNGSRAPELLKKWRGQVLIESSNASINEQIRPIIDNRFWLIPTAE 300
                  EP                               + E+       R  LIPTAE
Sbjct: 223 -------EP-------------------------------LTEKASDEEPRRLSLIPTAE 244

Query: 301 VPLTNLVRESILSEEELPMRLTACTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPE 360
           VP+TNLVR++IL E ELP+++TA TPCFR+EAG+ GRDTRG+IR HQF KVELV IT PE
Sbjct: 245 VPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQITRPE 304

Query: 361 KSAEEHERMLACAEAVLKKLDLAYRVVTLCTGDMGFASQKTYDIEVWLPGQNAYREISSC 420
            S    E +   AE VL+ L+L YR V LCTGDMGF S KTYD+EVW+P Q  YREISSC
Sbjct: 305 DSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYREISSC 364

Query: 421 SVCGDFQARRMNARYRPAEGKGPRYVHTLNGSGVAVGRALVAVLETYQQENGSVAVPDAL 480
           S   DFQARRM AR+R    K P  VHTLNGSG+AVGR +VA+LE YQ+ +G +A+P  L
Sbjct: 365 SNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAIPAVL 424

Query: 481 LPYMGGL 487
             YMGGL
Sbjct: 425 QKYMGGL 431