Pairwise Alignments

Query, 550 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

Subject, 531 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella loihica PV-4

 Score =  290 bits (742), Expect = 1e-82
 Identities = 186/532 (34%), Positives = 291/532 (54%), Gaps = 30/532 (5%)

Query: 17  ELLEASVAAHGAKPALSFLGRKWTYAEVGAAVNKVAAGLQA-MGVGKGTHVGLCLPNTPY 75
           +L+E +   +G K A   LG+  ++A++       AA LQ    +  G  V + LPN   
Sbjct: 19  DLIETAAERYGDKTAYVCLGKASSFADIERDSRYFAAYLQQHTQLEVGDKVAIQLPNITQ 78

Query: 76  SVIFFFAVMKAGGTVVNFSPLYVERELRHQIRDSGTTIMVVPDLKLIHSRVVAVAHEAGL 135
            VI  +  ++AG  +VN +PLY +REL HQ RDS    +VV  L  +   +  V  E  +
Sbjct: 79  FVIAAYGALRAGMILVNTNPLYTQRELIHQYRDSDAKALVV--LSDLLPTLETVIPETQI 136

Query: 136 KSIVVC-PMSGILPFPKGLLFNLFKRKEKAVYSTGDGMHVDYASLLKYGDRPE--PVEVD 192
           ++++   P+  I   P+               +     H+ +  +L  G + E  PVEV 
Sbjct: 137 ETVISTHPLDLIATQPQ---------------ADSQLAHIGFNQVLALGSQAEYRPVEV- 180

Query: 193 PAKDLAVLQYTGGTTGVPKGAMLTHANVSANARQLVQHAECERI-GVKRVLGVLPLFHVF 251
             + LA LQYTGGTTG+ KGAML+H+N+ AN  Q+      + + G +  +  LP++H++
Sbjct: 181 AQQSLAALQYTGGTTGLSKGAMLSHSNLLANMLQVQSRLASKFVEGEEIFIAPLPIYHIY 240

Query: 252 AMQTVMLIPICLGAEIILVPRFNLMSLLDDIEREKPTMFPGVPTIYAAINNVGGIEKRDL 311
           A     +     G  +++    ++ +L+  + +   T F G+ T++  + +    +  D 
Sbjct: 241 AFMVNFVYFEQGGCSVLIPNPRDISALIQTMSQHPFTGFAGLNTLFVGLCHQQSFQALDF 300

Query: 312 SSLTLSISGGAPLPLDVRTRFQELTGCPLVEGYGLSESSPVVSANPPLGLVKDGSVGTAL 371
           S L ++ISGG  L     + +Q  TGC + EGYGLSE+SPVVS N P GL   G++G  +
Sbjct: 301 SHLKITISGGTALTQAAASIWQSTTGCTISEGYGLSETSPVVSLNAP-GLECLGTIGRPV 359

Query: 372 PETVIEIRDLADSTRLMPVGQKGEVCVRGPQVMAGYWNRPDETTAVFV-DGALRTGDVGL 430
            +T ++I D ++    +P G+ GE+ V+GPQVM+GYW +P+ET  V   DG  +TGD+ L
Sbjct: 360 IDTQVKILDASEQE--VPQGEIGELAVKGPQVMSGYWQKPEETAKVMTSDGFFKTGDIAL 417

Query: 431 LDEDGYLFLVDRIKDVILCGGYNVYPRMIEEALYLHPAVAEAVAIGIPDSYRGQAPKAFV 490
             EDG   +VDR KD+I+  G+NVYP  +E+ L  H +V E   IG+ DS  G+A KA +
Sbjct: 418 ATEDGMHKIVDRKKDMIIVSGFNVYPNEVEDVLAAHESVLECAVIGVDDSRSGEAVKAAI 477

Query: 491 TLRKDA---QATPAELMEFLSAQISKIEMPKAIEIRDSLPKSVVGKLSKKEL 539
            LR+      AT   L+E   AQ++  ++PK IE   +LPKS VGK+ ++EL
Sbjct: 478 VLREPELANDATKQALLEHCRAQLAAYKLPKIIEFMPALPKSTVGKILRREL 529