Pairwise Alignments

Query, 550 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

Subject, 569 a.a., acyl-CoA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  231 bits (589), Expect = 6e-65
 Identities = 170/540 (31%), Positives = 271/540 (50%), Gaps = 22/540 (4%)

Query: 14  PVPELLEASVAAHGAKPALSFLGRKWTYAEVGAAVNKVAAGLQAMGVGKGTHVGLCLPNT 73
           PV E L A    +  K A+ F G + TYA++     + A  L+ +GVG+G  V + +PN 
Sbjct: 34  PVTEYLSAWARLNPTKVAIQFYGYELTYAQLDEMSTRFANVLRGLGVGQGDGVAVFMPNC 93

Query: 74  PYSVIFFFAVMKAGGTVVNFSPLYVERELRHQIRDSGTTIMVVPDLKLIHSRVVAVAHEA 133
           P   I F  ++K G   +  SPL  E ELRHQ+ DS   + +  D  L   R   V  E 
Sbjct: 94  PQFHIAFLGILKCGAVHMPVSPLSKEMELRHQLGDSQPKVALCYDALLPTMR--PVCQEL 151

Query: 134 GLKSIVVCPMSGILPFP-KGLLFNLFKRKEKAVYSTGDGMHVDYASLLKYGDRPEPVEVD 192
           G++ I+    + + P     +L +LF+  +  +    DG+ +D+   +    +     + 
Sbjct: 152 GIEHIITTSYTDVRPRAITAVLPDLFEIPKTPL---ADGI-IDFFEAIDNASKEVLDYIP 207

Query: 193 PAKDLAVLQYTGGTTGVPKGAMLTHANVSANARQL--VQHAECERIGVKRV-LGVLPLFH 249
              DLA + YT GTTG+PKG M TH N+         V   E    G   V L  LP F 
Sbjct: 208 ALDDLAAINYTSGTTGMPKGVMHTHRNMIGTMASYYPVTFGEVGPEGTDLVMLSFLPEFW 267

Query: 250 VFAMQTVMLIPICLGAEIILVPRFNLMSLLDDIEREKPTMFPGVPTIYAAINNVGGIEKR 309
           +    T +L+P+  GA ++L+ R++  + ++ +   K  M   +      I N   + + 
Sbjct: 268 IAGEDTGLLLPLYSGATLVLMARWDTKAFMELVHHHKVNMTIMLIDSVDEILNHPHLHQF 327

Query: 310 DLSSLTL--SISGGAPLPLDVRTRFQELTGCPLVE-GYGLSESSPVVSAN-----PPLGL 361
           DL+SLT    IS    L  D R R++ELTG  L E  YG++E+    +         + L
Sbjct: 328 DLTSLTTVPCISFIKKLNRDYRQRWRELTGTTLFEVAYGMTETHTCDTFTRGFQVDDMDL 387

Query: 362 VKDGS-VGTALPETVIEIRDLADSTRLMPVGQKGEVCVRGPQVMAGYWNRPDETTAVFVD 420
             D + +G  +P T I+I D   +  LMP+G +GE+ +R P ++ GYWN+PD    +F +
Sbjct: 388 SFDPAFLGLPVPGTEIKICDFV-TGELMPLGVEGEIQIRTPTLLKGYWNKPDLNKNLFEE 446

Query: 421 GA-LRTGDVGLLDEDGYLFLVDRIKDVILCGGYNVYPRMIEEALYLHPAVAEAVAIGIPD 479
           G   RTGD+G++ E+G+   + R K+++   G +V+P  +E  L  HPA+A    +G PD
Sbjct: 447 GGWYRTGDLGMITEEGFFRYLGRRKEMLKVNGMSVFPTEVESMLGQHPAIASCGVVGRPD 506

Query: 480 SYRGQAPKAFVTLRKDAQATPAELMEFLSAQISKIEMPKAIEIRDSLPKSVVGKLSKKEL 539
             +GQ P AFVTL+     T   L  +    ++  ++P+ I I++ LP +  GK+ K +L
Sbjct: 507 ERKGQVPVAFVTLKPGFDETQESLQAWCVNAMAIFKVPE-IRIQERLPMTATGKIRKVDL 565