Pairwise Alignments

Query, 550 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  233 bits (594), Expect = 1e-65
 Identities = 161/517 (31%), Positives = 268/517 (51%), Gaps = 26/517 (5%)

Query: 38  KWTYAEVGAAVNKVAAGLQAMGVGKGTHVGLCLPNTPYSVIFFFAVMKAGGTVVNFSPLY 97
           ++TY E     + +A GL  +G+ KG H+G+   N P  + F FA  K G  +V  +  Y
Sbjct: 33  RFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTVNTAY 92

Query: 98  VERELRHQIRDSGTTIMVVPD-------LKLIHSRVVAVAHEAGLKSIVVCPMSGILPFP 150
              EL + ++ S    + + D       L++++  V  +      K       S   P+ 
Sbjct: 93  KSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKL-----NSEEFPYL 147

Query: 151 KGLLFNLFKRKEKAVYSTGDGMHV-DYASLLKYGDRPEPVEVDPAKDLAVLQYTGGTTGV 209
           K +++ + + K + +Y+T + M + +Y S  K  +  + ++ D   D+  +QYT GTTG 
Sbjct: 148 KNVIY-VGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLDSD---DVINMQYTSGTTGF 203

Query: 210 PKGAMLTHANVSANARQLVQHAECERIGVKRVLGVLPLFHVFAMQTVMLIPICLGAEIIL 269
           PKG MLTH N+  N   + +  +      +R+   +PLFH F +   +L  +  G  +++
Sbjct: 204 PKGVMLTHKNILNNGYYIGEKQKFTE--EERLCLPVPLFHCFGIVLGVLALLTHGGTLVM 261

Query: 270 VPRFNLMSLLDDIEREKPTMFPGVPTIYAAINNVGGIEKRDLSSLTLSISGGAPLPLDVR 329
           +  F+ + +L  I++EK T   GVPT++ A  +    E  DLSSL   I  G+  P++  
Sbjct: 262 LEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLSSLRTGIMAGSTCPIEAM 321

Query: 330 TR-FQELTGCPLVEGYGLSESSPV---VSANPPLGLVKDGSVGTALPETVIEIRDLADST 385
            +   ++    +   YGL+E+SPV    S + P     + SVG A+P   ++I D     
Sbjct: 322 KKVMSDMYMREITISYGLTEASPVFTMTSVDDPFEKRVE-SVGKAMPHCEVKIIDPETGE 380

Query: 386 RLMPVGQKGEVCVRGPQVMAGYWNRPDETTAVFV-DGALRTGDVGLLDEDGYLFLVDRIK 444
            L P G  GE+C RG  VM GY+  P++T  V   DG L +GD+ + DEDGY  +V RIK
Sbjct: 381 TLAP-GNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDEDGYYKIVGRIK 439

Query: 445 DVILCGGYNVYPRMIEEALYLHPAVAEAVAIGIPDSYRGQAPKAFVTLRKDAQATPAELM 504
           D+I+ GG N+YPR IEE LY  P + +A  +GIPD   G+   AFV  ++  +    ++ 
Sbjct: 440 DMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEGYEIKEEDVR 499

Query: 505 EFLSAQISKIEMPKAIEIRDSLPKSVVGKLSKKELVE 541
           +F   +I++ ++PK + + +  P +  GK+ K +L E
Sbjct: 500 DFALEKIARYKVPKHVFVVEEFPMTASGKIQKFKLTE 536