Pairwise Alignments

Query, 450 a.a., Long-chain fatty acid transport protein from Xanthobacter sp. DMC5

Subject, 438 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Shewanella loihica PV-4

 Score =  119 bits (299), Expect = 1e-31
 Identities = 111/406 (27%), Positives = 175/406 (43%), Gaps = 49/406 (12%)

Query: 26  IAIPVALASSAAHAGGFGLREQSSYYQGTSFAGTAAGGDGLASMFWNPAAISFNPGLSVE 85
           +A+ V LASS A A GF L  QS+   G +FAG A   D  + +  NPAA++      + 
Sbjct: 9   LAVAVTLASSQAMAAGFQLNSQSATGVGRAFAGDAVIADNASVLSRNPAAMALFDEKQLS 68

Query: 86  GNVTYIAPHASI-DVF--SATAPITGTSLGNVGVSDMVDNGTLPTF-FATYAWDRWAIGF 141
             +TY     S+ DV+  S   PI     G+  V D  +   +P F + +   D++A G 
Sbjct: 69  MGLTYADVEVSVKDVYIDSLVGPI---HYGH--VDDAAEAKIIPNFYYVSPVNDKFAYGV 123

Query: 142 GVTSPYGLVTD-------------APCSWSGRYYGCYSSIFDMNAQLSVAYKLTDWMTIG 188
            + S +G  TD             AP    G+     + +  +N  LS +Y+  D  ++G
Sbjct: 124 AMFSNFGTGTDTTPMSQQLVNGLPAPLDLLGK-----TEVTTLNFNLSASYRFNDHFSVG 178

Query: 189 GGLNVNYINAKLTNAQFAGFAPPTNNLYAQ----VNGDDIGYGINLGVLFTLAPGTTLGI 244
            G++V Y    LT     G  P       Q    V+ D + +G  +G ++ +      G+
Sbjct: 179 AGVDVIYGQGTLTR---GGLVPTQAGAVQQDLVDVDADGVAFGGIIGAVYEINADHRFGM 235

Query: 245 GYKSQISQTLNGMLDVSVANIVPVKSVNAT---AGLTLPDQITASFRSKLDAQWTVLGTV 301
            Y+   S       D+++ N  PV   N       + +PD    +   +L  ++ +  T 
Sbjct: 236 SYR--FSPDFKATGDINMYN--PVAGANVAFDEINIPMPDIFQVAGFHQLTEKFALHYTA 291

Query: 302 EWTNWSTVQELTV---KAYGLPV----STLDLQWNDGWFFSGGVEYQWDPKLALRAGIGY 354
           + T W   +E+TV      G+PV    S     W+D W FS G  Y  +    +RAG  +
Sbjct: 292 QLTTWGDFKEITVTDGTIGGVPVAPEASLKTYAWDDSWLFSVGGTYTLNQDWTVRAGYMF 351

Query: 355 ELTPVPDSTRSPRLPDTNRFWLSGGFTYNFTQQFSADFAYTHIFGE 400
           +   V     S  +PD++R W + G TYN  +  S DF    I GE
Sbjct: 352 D-QGVVGEVSSISIPDSDRQWFTAGATYNLGKHASLDFGVAFIRGE 396