Pairwise Alignments

Query, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Xanthobacter sp. DMC5

Subject, 595 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Burkholderia phytofirmans PsJN

 Score =  659 bits (1699), Expect = 0.0
 Identities = 335/598 (56%), Positives = 418/598 (69%), Gaps = 5/598 (0%)

Query: 1   MQVYTPPLRDMRFVLHELHGSE-ELSKLKGLEELSPDLIDAVLEEAGKFVTEVLAPLNQS 59
           M  Y  PLRDM+FVLHEL   E E+ ++    +L  D I+AVLEEAGKF +EVL PLN S
Sbjct: 1   MGQYAAPLRDMQFVLHELLNVEAEIKQMPKHADLDADTINAVLEEAGKFCSEVLFPLNHS 60

Query: 60  GDLEGCTYE-NGVVRTPKGFKEAYTAFREGGWNGIACDPKYGGQGLPASVNKLVEEMLCS 118
           GD EGCTY  +GVV TPKGFKEAY  + E GW  + CDP+YGGQGLPA VN  + EML S
Sbjct: 61  GDQEGCTYVGDGVVTTPKGFKEAYAQYVEAGWPALGCDPEYGGQGLPAFVNNALYEMLNS 120

Query: 119 GNLAFGICPGLTHGAYQALKAYASEELKERFLPKMVDGVWSGSMCLTEPQCGTDLGLVRT 178
            N A+ + PGL+HGAY+ L A+ + EL++R+LPK+V GVW+G+MCLTEP CGTDLG++RT
Sbjct: 121 ANQAWTMYPGLSHGAYECLHAHGTPELQQRYLPKLVAGVWTGTMCLTEPHCGTDLGILRT 180

Query: 179 KAEPKADGSYKITGNKIFISAGEQDMTENIVHLVLARLPDAPKGIKGISLFLVPKFLPKE 238
           KAEP +DGSY I+G KIFIS+GE D+ ENIVHLVLARLP AP G KGISLF+VPKF+P E
Sbjct: 181 KAEPNSDGSYAISGTKIFISSGEHDLAENIVHLVLARLPGAPNGTKGISLFIVPKFVPNE 240

Query: 239 DGSVGPRNGVLCTGIEHKMGIHGSSTCQMSFDEATGWLVGEPHKGMRAMFAMMNSERLSV 298
            G  G RNGV C  IEHKMGIHG++TC ++ D A GWLVGEP+KG+ AMF MMN+ RL V
Sbjct: 241 AGEPGERNGVKCGSIEHKMGIHGNATCVINLDNAKGWLVGEPNKGLNAMFVMMNAARLGV 300

Query: 299 GTQGLGLGEAAYQAAVVYAKERLQGRALSGAKHPDKPADPIIVHPDVRRTLMTMRAYNEG 358
           G Q LGL E  YQ ++ YAKERLQ R+L+G K P+K ADPIIVHPDVRR L+T +AY E 
Sbjct: 301 GMQSLGLTEIGYQNSLTYAKERLQMRSLTGPKAPEKAADPIIVHPDVRRMLLTQKAYAEA 360

Query: 359 CRALAGWVARALDLMERAEDPEESKRAEDFTALMTPIVKALFTDLGFEATSMGMQVYGGH 418
            RA + W A  +D      D    K A D  AL+TPI+KA  +D  FE+T+  MQ+YGGH
Sbjct: 361 ARAFSYWSALHIDKELSHADESVRKEAADLVALLTPILKAFLSDNAFESTNHAMQIYGGH 420

Query: 419 GYIRDHGMEQYVRDARIAMIYEGTNGVQALDLVGRKLPAHMGRYLRSFFHPVLNYMDAKL 478
           G+I + GMEQYVRDARI MIYEGTN +QALDL+GRK+   MG  ++ F   V ++++A+ 
Sbjct: 421 GFIAEWGMEQYVRDARINMIYEGTNAIQALDLLGRKILGDMGAKMKKFGKLVSDFVEAEG 480

Query: 479 DDENLGPLITPLSKAFGALQLATAHIAEKGLKDPEEAGAAATEYLRLFGLVALGYMWVRM 538
               +   I PL+     +Q  T  I  K +++P+E GAAA  YLR  G +   Y W RM
Sbjct: 481 VKPEMQEFINPLADIGEKVQKLTMEIGMKAMQNPDEVGAAAVPYLRTVGHLVFSYFWARM 540

Query: 539 AEVAFEKRVSNPDDAAFYDAKIVTARFFMEKLLPDVAALWGSIKAGKGSMMALDEAMF 596
           A VA +K  S      FY AK+ TARF+  KLLP+ A      +AG  S+M ++EA+F
Sbjct: 541 ARVALDKEASGD---PFYKAKLATARFYFAKLLPETAMTIRQARAGSKSLMDVEEALF 595