Pairwise Alignments

Query, 391 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 413 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score =  163 bits (413), Expect = 7e-45
 Identities = 119/376 (31%), Positives = 190/376 (50%), Gaps = 25/376 (6%)

Query: 24  VLFLALLGGGAWVWDKKPWLAASGQKAAPPPR----------VVAVLAGKAERTSLPVRV 73
           +L LA+   G  VW    WL  + Q+    P            V V   K E+    V  
Sbjct: 17  LLILAVAAIGLLVW----WLWPAPQETPQRPGGRPGFGAFGGPVPVRVAKVEQGEFEVFN 72

Query: 74  EALGTVESMVTVPVRSRVAAAVEKVGFADGATVKEGDLLYQLDPRVIDAQILQAEATLNR 133
           +ALG+V  + TV +RSRV   + ++ F +G  VK+GDLL  +DPR     + QAE TL +
Sbjct: 73  KALGSVTPLNTVNLRSRVGGELVELRFEEGQRVKKGDLLAVIDPRPYKVALQQAEGTLQQ 132

Query: 134 DKVQLEKNLRDVERYAGLATRNAVSQVQVDDARTTADVQKAVVAQDEANLTALRVQRGYY 193
           ++ QL+    D ERY GL   +++++  +D         +  +A ++A++   R+   + 
Sbjct: 133 NRAQLKNAQVDFERYRGLFADDSIAKQTLDTQEALVSQYQGTLAANQASVNEARLNLEFT 192

Query: 194 EIRSPATGRIGVSSVRPGTVIRVDDT--LATVRQLAPIYVAFGLPERYIAGL--RAAKDA 249
           +IRSP  GR+G+  +  G ++  +DT  L  + Q  P+ ++F LPE  +  +  R  +  
Sbjct: 193 QIRSPIDGRVGLRQLDVGNLVAANDTTPLVVITQTQPMSISFTLPEGDLLPVLTRYRQGD 252

Query: 250 KVSFTIQGTGETI--SGGTVAVIDNTIEPQTGTLTARAIFPNADERLWPGALGAVTVTLR 307
           K++  I   GE +    G +  IDN I+  TGTL  +A F N  E L P     V V LR
Sbjct: 253 KLAVQIWDRGEKLMFGEGLLESIDNQIDATTGTLRLKARFDNEQELLIPNQF--VNVRLR 310

Query: 308 IE--DNVVAVPSEAVQNGQDGPFVFIV-DDGIAHVRPVTVTRTVDGRSVIAKGLDGGETV 364
           +E   + V +PS A+Q G  G F ++V +D    +R +    +    +V+ +GL+ GE V
Sbjct: 311 VETLSDAVLIPSAALQFGSRGTFAYVVGEDNKVQLRLLKAGPSNGETTVVLEGLEVGERV 370

Query: 365 VTDGQLSLREGSRVSV 380
           V +G   LR+G+ V V
Sbjct: 371 VMEGTDRLRDGAEVEV 386