Pairwise Alignments

Query, 391 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 405 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  162 bits (411), Expect = 1e-44
 Identities = 106/352 (30%), Positives = 174/352 (49%), Gaps = 21/352 (5%)

Query: 45  ASGQKAAPPPRVVAVLAGKAERTSLPVRVEALGTVESMVTVPVRSRVAAAVEKVGFADGA 104
           ++  KA P P VV     + +   LP+  E +G       V VR+RV   + +  +A+G 
Sbjct: 30  SAAPKAMPAPLVVVQ---QVQPRDLPLTYEYVGQTAGSREVEVRARVGGILLRRAYAEGR 86

Query: 105 TVKEGDLLYQLDPRVIDAQILQAEATLNRDKVQLEKNLRDVERYAGLATRNAVSQVQVDD 164
            VK+GDL++ +DP    A + QA     + + +L+    + +R   L   NAVSQ   DD
Sbjct: 87  PVKKGDLMFDIDPEPFKADLDQALGQQAQAEARLQSAQSNRDRVLPLYRENAVSQKDRDD 146

Query: 165 ARTTADVQKAVVAQDEANLTALRVQRGYYEIRSPATGRIGVSSVRPGTVIRV---DDTLA 221
           A    D  KA + +  A +   R+  GY  + +P +G     +   G+++        L 
Sbjct: 147 AVAEFDSAKAALEEARARVKTARINLGYTRVEAPISGMTSKETRSEGSLVTTTAEGSLLT 206

Query: 222 TVRQLAPIYVAFGLPERYIAGLRAAKD------AKVSFTIQGTGETISG------GTVAV 269
           T+ ++ P+YV F  P   +  LR  ++       K S+ +  T   I G      GTV  
Sbjct: 207 TISKVDPVYVNFSAPSVDLFRLRRMREEGRITLPKKSYEV--TVRLIDGSTYKRTGTVNF 264

Query: 270 IDNTIEPQTGTLTARAIFPNADERLWPGALGAVTVTLRIEDNVVAVPSEAVQNGQDGPFV 329
           ID  ++P TGT+  RA FPN +  + PG    V +T  + +N +A+P  AV   Q GP V
Sbjct: 265 IDPLVDPLTGTIRVRAEFPNPEAEVLPGQFVRVLMTGAVYNNALAIPQRAVLQTQQGPMV 324

Query: 330 FIVDDG-IAHVRPVTVTRTVDGRSVIAKGLDGGETVVTDGQLSLREGSRVSV 380
           +++ +G +A  RPV ++  +D + ++ KGL  GE +V +G L +R G  V++
Sbjct: 325 WVIGEGDVAQPRPVEISLPIDNQYIVEKGLAPGERIVVEGLLKVRPGQPVTI 376