Pairwise Alignments

Query, 391 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  133 bits (335), Expect = 8e-36
 Identities = 100/351 (28%), Positives = 157/351 (44%), Gaps = 18/351 (5%)

Query: 52  PPPRVVAVLAGKAERTSLPVRVEALGTVESMVTVPVRSRVAAAVEKVGFADGATVKEGDL 111
           PPP+V     G      +   +E  GT+ ++ +V + +RV   +    F DG+TV +GD 
Sbjct: 37  PPPKVTV---GAPHVGPVTEYMEFSGTIAAVESVDITARVTGTLRSAQFRDGSTVHKGDP 93

Query: 112 LYQLDPRVIDAQILQAEATLNRDKVQLEKNLRDVERYAGLATRNAVSQVQVDDARTTADV 171
           L+ ++P    A + +AEA L   +  L +   ++ R   L T  A S+  V   +   D 
Sbjct: 94  LFIIEPEPYQAALQRAEAELEVQQAALARAETELARSRKLLTEKAGSETDVVKWQQQRDS 153

Query: 172 QKAVVAQDEANLTALRVQRGYYEIRSPATGRIGVSSVRPGTVI--RVDDTLATVRQLAPI 229
            KA +++ +A +   R+  GY  I +P  G+I      PG V+       LAT+ +   +
Sbjct: 154 AKANISRAKAQIETARIDLGYTRITAPFDGQISRRFADPGNVVGPGAVTRLATIVRRDQV 213

Query: 230 YVAFGLPERYIAGLRA---------AKDAKVSFTIQGTGETISGGTVAVIDNTIEPQTGT 280
           +V F + ER +  L A         A    +   +         G +   D  ++P TGT
Sbjct: 214 HVYFNINERDLLRLMAERPKPKTASAPTMPLELALADEDGFPHAGKLDYADPGVDPATGT 273

Query: 281 LTARAIFPNADERLWPGALGAVTVTLRIEDNVVAVPSEAVQNGQDGPFVFIVD-DGIAHV 339
           +  R +FPN   RL PG    + V +   D  + VP  A+   Q G +V IV+   IA  
Sbjct: 274 MQLRGLFPNPSGRLLPGLFARIRVAVGQSDKAMMVPDRAIGQDQSGSYVIIVNAQNIAEQ 333

Query: 340 RPVTVTRTVDGRSVIAKGLDGGETVVTDGQLSLREGSRVSVRTRTAVPATG 390
           R V +    +G  V++KGL   + VV +G    R GS V     T  P TG
Sbjct: 334 RAVVLGPLHEGYRVVSKGLSAEDRVVVNGIQRARPGSPVD---PTPAPDTG 381