Pairwise Alignments

Query, 298 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 307 a.a., ABC transporter for L-leucine/L-phenylalanine/D-alanine, permease component 1 LivH (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  116 bits (291), Expect = 6e-31
 Identities = 91/307 (29%), Positives = 151/307 (49%), Gaps = 28/307 (9%)

Query: 3   LLNFFQLLVSGIAMGAIYTLTAKGLFITHLATHRLNFGQGDFLMVGAFASI----GMLTA 58
           + +FFQ LV+G+ +G+ Y L A G  + +     +NF  G+  M+G++ +     G+   
Sbjct: 4   IYHFFQQLVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIAIAGLAMM 63

Query: 59  GVPA-PL----AVLGVLVLMGVLGYLLERFAIRPLDRLGDRAGAYSWVLTTAGAALILQN 113
           G+ + PL    A +  +V+    GY +ER A RPL R  +R      +++  G ++ LQN
Sbjct: 64  GLDSVPLLMTAAFIASIVVTSSYGYSIERIAYRPL-RGSNRLIP---LISAIGMSIFLQN 119

Query: 114 IVELGFGKSAQYAPPL----FSKTRDNVISILGVGIFFEEAAIIITAFIVVGAFYWFLFG 169
            V L      +  P L    F+        +L   I + +  + +   + +     F+  
Sbjct: 120 TVLLSQDSKDKSIPNLIPGNFAIGPGGAHEVL---ISYMQIVVFVVTLVAMLGLTLFISR 176

Query: 170 SRWGKAVYAVAFNPEAASLFGIDVRGVVVLVFVLAALMAGISGVLVGPLVSV-HPHMGLI 228
           SR G+A  A A + + A+L GI+   ++ L FV+ A +A I+ VL+     V +P+ G +
Sbjct: 177 SRLGRACRACAEDIKMANLLGINTNNIIALTFVIGAALAAIAAVLLSMQYGVINPNAGFL 236

Query: 229 FTIKALAVAAVGGFTNPVGILLGGLLFGVAEAFSNYWDSAFGDLYPLLFVMALLAV---- 284
             +KA   A +GG  +  G +LGGL+ GVAEAF       FGD Y  +    LL +    
Sbjct: 237 VGLKAFTAAVLGGIGSIPGAMLGGLVLGVAEAFG---ADIFGDQYKDVVAFGLLVLVLLF 293

Query: 285 RPSGLFG 291
           RP+G+ G
Sbjct: 294 RPTGILG 300