Pairwise Alignments

Query, 298 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 307 a.a., branched-chain amino acid ABC-type transport system, permease component from Dechlorosoma suillum PS

 Score =  140 bits (352), Expect = 5e-38
 Identities = 87/309 (28%), Positives = 163/309 (52%), Gaps = 25/309 (8%)

Query: 6   FFQLLVSGIAMGAIYTLTAKGLFITHLATHRLNFGQGDFLMVGAFASIGMLT----AGVP 61
           F Q +++G+ +G+IY L A G  + +     +NF  G+ +M+GA  ++ ++     +G+P
Sbjct: 4   FLQQIINGLVLGSIYALVALGYTMVYGILGLINFAHGEVVMIGALTALTVVKLLAGSGLP 63

Query: 62  AP-LAVLGVLVLMGV---LGYLLERFAIRPLDRLGDRAGAYSWVLTTAGAALILQNIVEL 117
            P +A++G++    V   +GY +E+ A RPL +    A   + ++T  G +++LQN+  +
Sbjct: 64  GPVIALIGLMAAAPVCMAIGYGIEKIAYRPLRK----APRLAPLITAIGVSIVLQNLAMM 119

Query: 118 GFGKSAQYAPPLFSKTRDNVISILGVGIFFEEAAIIITAFIVVGAFYWFLFGSRWGKAVY 177
            +G+S    P +       V   LG      +  I++ A  ++      +  +R G+A+ 
Sbjct: 120 VWGRSYHSFPAVLPAEAHEV---LGATFTDLQVIIVLVAAGMMAGLLLLINRTRLGRAMR 176

Query: 178 AVAFNPEAASLFGIDVRGVVVLVFVLAALMAGISGVLVGPLVSV-HPHMGLIFTIKALAV 236
           A A NP  A L G++V  ++ L FV+ + +A ++G++V    S+ H +MG I  +KA   
Sbjct: 177 ATAENPAIAQLMGVNVNHIISLTFVIGSALAAVAGLMVSANYSIAHYYMGFILGLKAFTA 236

Query: 237 AAVGGFTNPVGILLGGLLFGVAEAF---------SNYWDSAFGDLYPLLFVMALLAVRPS 287
           A +GG  N  G ++GG+L G+ E+            +  S + D++    ++ +L  RPS
Sbjct: 237 AVLGGIGNLAGAMIGGILLGLIESLGAGYIGDITGGFLGSHYQDVFAFFVLILVLVFRPS 296

Query: 288 GLFGERRAD 296
           GL GE+ A+
Sbjct: 297 GLVGEKVAE 305