Pairwise Alignments

Query, 578 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 297 a.a., nitrate ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 65.1 bits (157), Expect = 4e-15
 Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 10/188 (5%)

Query: 376 TMLRVIVLIALATLIWVPIGVWIGLRPAWAERVQPMAQFLAAFPANIIFPFAVVAIVRLG 435
           ++ RV +  A+A  + V +G  +G        + P+ Q L   P     P ++ A  + G
Sbjct: 106 SLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSLAAF-QDG 164

Query: 436 LDPDIWLSPLMVLGTQWYILFNVVAGASAFPNDLREAAGTFRIRGWSWWKKVMLPGIFPY 495
               I++  +  +   W I+ N   G    P D +  A   R+  + ++ K+MLP   PY
Sbjct: 165 TPSAIFVIFITAI---WPIIINTAVGIRNIPQDYQNVAKVLRLNSFEYFGKIMLPAAAPY 221

Query: 496 YVTGAITASGGSWNASIVAEVASWGDTTLRAHGIGAYIADATAAGDYPRIVLGIAVMSIF 555
             TG     G SW A + AE+   G       GIG +I DA  +     I++ +  + I 
Sbjct: 222 IFTGLRIGIGLSWLAIVAAEMLIGG------VGIGFFIWDAWNSSLISDIIVALIYVGIV 275

Query: 556 VILFNRLL 563
             L +RL+
Sbjct: 276 GFLLDRLI 283



 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 14/173 (8%)

Query: 88  GALAAKSRRAEMVLIPMLDILQSVPVLGFLSFTVVGFMSLFPGKVLGVELAAIFAIFTSQ 147
           G L  +S  A   L P+  +L++VP L +L  ++  F    P        +AIF IF + 
Sbjct: 125 GTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSLAAFQDGTP--------SAIFVIFITA 176

Query: 148 AWNMTFSFYQSLKTVPRDLDEATRSFRLTGWQRFWRLEVPFSMPGLVWNTMMSMSGGWFF 207
            W +  +    ++ +P+D     +  RL  ++ F ++ +P + P +     + +   W  
Sbjct: 177 IWPIIINTAVGIRNIPQDYQNVAKVLRLNSFEYFGKIMLPAAAPYIFTGLRIGIGLSWLA 236

Query: 208 VVASEAISVGDTTITLPGVGSYVALAIKEQNLPAVGWAVLAMLAVILIYDQLL 260
           +VA+E +  G       G+G ++  A     +  +  A++ +  V  + D+L+
Sbjct: 237 IVAAEMLIGG------VGIGFFIWDAWNSSLISDIIVALIYVGIVGFLLDRLI 283