Pairwise Alignments

Query, 524 a.a., FeMo cofactor biosynthesis protein NifB from Xanthobacter sp. DMC5

Subject, 297 a.a., radical SAM protein from Methanococcus maripaludis S2

 Score =  216 bits (551), Expect = 7e-61
 Identities = 109/274 (39%), Positives = 166/274 (60%), Gaps = 10/274 (3%)

Query: 66  HPCYSEEAHHHYARMHVAVAPACNIQCNYCNRKY--DCANESRPGVVSEKLTPEQAAKKV 123
           HPCY+E+ HH   R+H+ VAP CNI C +C R    +   E RPGV    + P +    +
Sbjct: 16  HPCYNEKLHHKIGRVHLPVAPKCNIACRFCKRSIGDESVCEDRPGVSHHIMKPAEVENYL 75

Query: 124 LAVASTIPQMTVLGIAGPGDPLANPEKTFKTFELIAKTAPDIKLCLSTNGLALPDHVDTI 183
             +    P + V GIAGPGD L N E+TF+T E++ +  PD+  CLSTNGL LP + + +
Sbjct: 76  NDLLEKSPNIKVAGIAGPGDSLFN-EETFETLEVLKEKFPDLVRCLSTNGLLLPKYAERL 134

Query: 184 AGFNVDHVTITINMVDPEVGAKIYPWVFWKHKRYTGYEAAKLLTDRQMLGLEMLTERGIL 243
           A   V  VT+T+N VDP++ A+I  W++++ K Y G E A++L   Q+ G++ L E  + 
Sbjct: 135 AELGVKTVTVTVNAVDPKIQAQIVDWIYYEGKVYRGEEGAEILIKNQIEGVKKLAEFDVA 194

Query: 244 CKVNSVMIPGINDKHLVEVNRAVKSRGAFLHNIMPLISSPEHGTVFGLNGQRGPTAQELK 303
            K+N+V+IP IN  H+VE+ +  + + AF+HN++PLI       ++ +   R PT  E+ 
Sbjct: 195 VKINTVLIPEINMDHIVEIAKTFE-KDAFVHNVIPLI------PMYKMENLRKPTCDEIS 247

Query: 304 ALQDECEGEMNMMRHCRQCRADAVGLLGEDRSAE 337
            ++D  E  ++  R C+QCRADAVGL+ E +  E
Sbjct: 248 NIRDTAEEYLHQFRACQQCRADAVGLVTEHKHLE 281