Pairwise Alignments

Query, 98 a.a., Ferredoxin-3 from Xanthobacter sp. DMC5

Subject, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 44.3 bits (103), Expect = 1e-09
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 15/66 (22%)

Query: 22 DKCIGCGRCYKVCGRDVMTLKGINEDGDIVSLDDDEDDEVEKKVMVMNDMGACIGCGACA 81
          +KCI C  C + C  D +++               E +E  KK M + D G+CI CG C 
Sbjct: 47 EKCISCSACKESCPSDAISM---------------EFNEEFKKEMPVFDAGSCINCGNCV 91

Query: 82 RVCPAN 87
            CP N
Sbjct: 92 ESCPTN 97



 Score = 40.8 bits (94), Expect = 2e-08
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 6/72 (8%)

Query: 20  DKDKCIGCGRCYKVCGRDVMTLKGINEDGDIVSLDDDEDDEVEKKVMVMNDMGACIGCGA 79
           D   CI CG C + C  +V+ +  + ++   +  +      V K + ++ D   C+ CG 
Sbjct: 80  DAGSCINCGNCVESCPTNVLEMGTLRKEAKELLWN------VPKIINLLIDEEVCVSCGT 133

Query: 80  CARVCPANCQIH 91
           C   CP +   H
Sbjct: 134 CENACPVDAISH 145



 Score = 35.8 bits (81), Expect = 5e-07
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 15/93 (16%)

Query: 16  LLDIDKDKCIGCGRCYKVC--------------GRDVMTLKGINEDGDIVSLDDDEDDEV 61
           L +ID + C+ C  C K C                 +   + I  D + +  +  E  +V
Sbjct: 150 LYEIDVNLCVSCKNCLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFKEKSDV 209

Query: 62  EKKVMVMNDMGACIGCGACARVCPANCQIHGLE 94
             ++  +     CIGCG C  VCP +  +  L+
Sbjct: 210 IAEIPRIVP-SLCIGCGNCVDVCPGSIDLERLK 241



 Score = 34.3 bits (77), Expect = 1e-06
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 18/69 (26%)

Query: 19  IDKDKCIGCGRCYKVCGRDVMTLKGINEDGDIVSLDDDEDDEVEKKVMVMNDMGACIGCG 78
           +D++KCIGC  CY+ C      L  I+++ ++  ++ +                 C+ CG
Sbjct: 278 VDEEKCIGCRICYRSCNVPEAIL--ISKETNLPYINPE----------------YCVRCG 319

Query: 79  ACARVCPAN 87
            C   CP +
Sbjct: 320 LCQNACPVD 328



 Score = 26.2 bits (56), Expect = 4e-04
 Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 26/62 (41%)

Query: 24  CIGCGRCYKVCGRDVMTLKGINEDGDIVSLDDDEDDEVEKKVMVMNDMGACIGCGACARV 83
           CIGCG C  VC   +                     ++E+  +      +CI  G C  V
Sbjct: 221 CIGCGNCVDVCPGSI---------------------DLERLKVT-----SCIKSGKCLEV 254

Query: 84  CP 85
           CP
Sbjct: 255 CP 256