Pairwise Alignments

Query, 400 a.a., Macrolide export protein MacA from Xanthobacter sp. DMC5

Subject, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 87/378 (23%), Positives = 158/378 (41%), Gaps = 68/378 (17%)

Query: 30  PEVVVYPVTRGEL--VKTVVASGHVETAFRVEIGSQITGMVREVLVDEGQAVTQGQPLVA 87
           PE  V  VT   +  V  + A G +E    V + ++  G++ ++  + G  V + QPLV 
Sbjct: 40  PEFPVTVVTANPVDWVPVIEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVL 99

Query: 88  LETNELKALEVQAQGAKAQAEARVRQMRELTRPAAEEA-LKQAKANLANAEAAYDRAQQL 146
           L++                              A E A LK  +A L  A+A Y+R + L
Sbjct: 100 LDS------------------------------AVERANLKSTEARLPAAKAKYERYKGL 129

Query: 147 AKSGAGTRVTLDDATKNIDVARTQVRTAELQVYTSSPGGSDYVMAETQLNQASANLEMVQ 206
              G+ ++ + D+A                               E      SA++E ++
Sbjct: 130 FAKGSISKESYDEA-------------------------------EASYYALSADIESLK 158

Query: 207 ARLGYATITAPRDGVLISRNVERGAVVQAGKALLVLAPAGDMQLVLQIDEKNLGLLKLGQ 266
           A +    I AP  GV+  RNV  G  +Q G  ++ L     M+L   + ++++  + L Q
Sbjct: 159 ATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQ 218

Query: 267 TALASADAYPDQRFAATVTYINPSVDITRASVEVKLTVADPPAYLRQDMTVSVDIAVDRR 326
                 DAYP   F  +++ I P+V +    ++V+  + +    LR  M    +I + + 
Sbjct: 219 EVDIFVDAYPQTSFKGSISAIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKL 278

Query: 327 AAAVIVPARTV-HDATSAAPWVLVVRDGRARVQK--VRIGLRAGEYVEILEGVAPGEMVL 383
              V +P   + +       +++   +G  RVQ+  V++G R+     ILEGV PG++V+
Sbjct: 279 ENQVTLPQTAITYTLYGDNVYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVV 338

Query: 384 PLSS-GVRAGQRIRPVQA 400
                 +  G ++R V++
Sbjct: 339 TTGQVRLSNGAKVRIVES 356