Pairwise Alignments

Query, 400 a.a., Macrolide export protein MacA from Xanthobacter sp. DMC5

Subject, 417 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella loihica PV-4

 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 84/328 (25%), Positives = 146/328 (44%), Gaps = 65/328 (19%)

Query: 58  VEIGSQITGMVREVLVDEGQAVTQGQPLVALETNELKALEVQAQGAKAQAEARVRQMREL 117
           V+I ++++G V+ + + + QAV+QGQ LV LE             AKA+A          
Sbjct: 92  VQIAAEVSGKVQAINLSDNQAVSQGQVLVHLED------------AKAKAN--------- 130

Query: 118 TRPAAEEALKQAKANLANAEAAYDRAQQLAKSGAGTRVTLDDATKNIDVARTQVRTAELQ 177
                   L +AKA L +        ++L K  A T+  +D    ++D+A          
Sbjct: 131 --------LAEAKAYLNDERRKLGEYKRLIKQHAITQTEIDAQLASVDIAE--------- 173

Query: 178 VYTSSPGGSDYVMAETQLNQASANLEMVQARLGYATITAPRDGVLISRNVERGAVVQAGK 237
                                 A L+  QA L Y T+ AP DGV+   +   G +V  G 
Sbjct: 174 ----------------------ARLQAAQADLDYHTLKAPFDGVIGLVDFSLGKLVSVGS 211

Query: 238 ALLVLAPAGDMQLVLQIDEKNLGLLKLGQTALASADAYPDQRFAATVTYINPSVDITRAS 297
            L+ L     M+L LQI E+ L  + LG   +AS+ A+P ++F   V  + P ++    +
Sbjct: 212 ELVSLDDLSSMRLDLQIPERYLSQIYLGMPVVASSSAWPGEQFHGQVVAMAPRINSETLN 271

Query: 298 VEVKLTVADPPAYLRQDMTVS--VDIAVDRRAAAVIVPARTVHDATSAAPWVLVVRDGRA 355
           ++V++   +P   LR  M +S  +D A   +A   +VP + +  + +     ++  D  A
Sbjct: 272 LKVRVNFDNPSLQLRPGMLISARLDFAPVTQA---VVPVQALEYSGTKRFVYVIDSDNIA 328

Query: 356 RVQKVRIGLRAGEYVEILEGVAPGEMVL 383
           R  +V +G R  + V I +G++ G+ ++
Sbjct: 329 RRTQVTLGARIDDQVLIDDGLSLGDRIV 356