Pairwise Alignments

Query, 464 a.a., Regulatory protein AtoC from Xanthobacter sp. DMC5

Subject, 462 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  333 bits (853), Expect = 9e-96
 Identities = 182/452 (40%), Positives = 267/452 (59%), Gaps = 1/452 (0%)

Query: 4   MAAKILIVDDEVRHGEVLEAALAERGFEAVSTNTVAKALAYCASQPVDLVLSDLRMPDRG 63
           M   IL+++D+     +L  AL ERG+   + N     +    S   DLVL+D+ +P   
Sbjct: 1   MKGHILLIEDDTAFQGMLREALEERGYRVTAVNRAEDGVRIVRSGDFDLVLTDVMLPGIS 60

Query: 64  GADLLRALKHEQPELPVIIMTAYASVRGAVDLVKDGAFDYVAKPLDLDDVVATIARALRL 123
           G + +  L+   P   +++MTA+++   A++ VK GA+D+ +KP  L ++   I RA+  
Sbjct: 61  GVEAIPRLREAAPGTDIVVMTAFSTRELALEAVKLGAYDFFSKPFSLKELDIVIRRAMEK 120

Query: 124 KAVESENSRLRSELEERYRFDNLLGESAVFHHVLRQVTEVAPSRASVLLLGESGTGKELV 183
           + ++ E   LR  L        ++GES     V   +  +AP  ++VL++GESGTGKEL+
Sbjct: 121 RRMQGEIVALRETLRRDTPTSRIVGESRAMRDVKALLERIAPLESTVLIMGESGTGKELI 180

Query: 184 ARAIHYNSPRRDLPFVAVNCAAIPETLIESELFGHVKGAFTGATGVREGRFAAANQGTLF 243
           A  I   SPR   PFV VNCAAIPE L E+ELFGH KGAFTGA     G+F  A  G + 
Sbjct: 181 ADTIRALSPRAANPFVKVNCAAIPEHLFENELFGHEKGAFTGAATAMPGKFEQAQGGMIM 240

Query: 244 LDEIADMPLPVQAKVLRALQEQSFEPVGSSKSVSVDVRIIAATHKDLQKEIAAGTFRMDL 303
           LDEI DMPL +Q K+LR ++++  E +G    V +DVRIIAAT+++L + +    FR DL
Sbjct: 241 LDEIGDMPLAIQPKLLRVVEQKQVERLGGRAPVPLDVRIIAATNQNLAERVREKAFREDL 300

Query: 304 YYRLAVFPITLPPLRERTDDIVLLADHFLAAATRDMGKRVKGLTPEAQAMLTRYRWPGNV 363
           YYRL+V  + +PPLR+R DDI LLA +F+      +G  V GL+P+A A+L  + WPGNV
Sbjct: 301 YYRLSVAVVLIPPLRDRKDDIPLLAQYFVNKLEGTLGLPVHGLSPDAIAVLMDHDWPGNV 360

Query: 364 RELQNCMERAAIVARGDLVGPGDLLLFEANGDTDVQSHTLNG-DLDSELSRIEREFVLQA 422
           R+L N +ERAAI A G +     +        ++V   TL+G DL + L  +ER  +L A
Sbjct: 361 RQLANVLERAAIAADGLICARDVMAAIGTARGSNVDKATLSGMDLKTTLRMVERNLILDA 420

Query: 423 LKDSGGVQARAAEKLGITERSLWHRIKKLAIK 454
           L+   G Q  AA  LG+T ++LW +++K  I+
Sbjct: 421 LRRCHGRQTEAAVLLGLTPKNLWAKLRKHGIR 452