Pairwise Alignments

Query, 423 a.a., Tyrosine recombinase XerC from Xanthobacter sp. DMC5

Subject, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

 Score = 54.7 bits (130), Expect = 5e-12
 Identities = 84/368 (22%), Positives = 141/368 (38%), Gaps = 52/368 (14%)

Query: 31  GFGVRVLPSGLKTFILQYRNAEGIKRRTNLGRYGVMTVEQARDKAKIKLGAVAAGEDPAD 90
           G  + V P+G K +  +YR  +G +    +G +  +++ +AR   +     V  G  PA 
Sbjct: 28  GLFLLVKPAGGKLWRWKYR-LQGKENLFAIGSFPQVSLAEARTAREKARALVKQGIHPAH 86

Query: 91  EARQARSG-------------MTVAEMCDWYLAEARAGNILGRKNRPIKA-SSLDMDASR 136
           E +Q +                + A++   YLAE +          P+ A SS     SR
Sbjct: 87  ERQQVKQRNLEALAERKRAQESSFAKVAQAYLAEIK----------PVFAHSSYRTKESR 136

Query: 137 IRTHITPLIGKRVVRHLTIADVEQMQADVKNGKTARPRAGGRGGKASGGAGVAGRCVGTL 196
           IR +++P      +  + +  +  +  + K                + GA  A    G L
Sbjct: 137 IRKYLSPKFDGMPMSDIGVKQIRPLLEECK----------------AHGAWAAIHVKGDL 180

Query: 197 QAIIGHAKHKGLLSEHPT---KGAKKLTGNKKSRRLSVAEIEALGTAIAYAERNGENPTA 253
            AI   A  +GL+  +P    +G  ++  ++    ++  +I+    A+      G   TA
Sbjct: 181 SAIFEFAVVRGLVEANPIPSLRGLLRVPASESKAAMTREQIQKFYQALR--GYRGYPETA 238

Query: 254 LGVLRLLLLTGYRREEAQAMRREWVHPKGGYVAFPDTKGDAQIRAIGPAALRIV----DA 309
           L  LRL+ LT  R  EA     E    +      P  K  A+   + P + + +    D 
Sbjct: 239 L-CLRLIALTACRPGEAADAEWEEFDFEDAVWRRPAAKMKARREHVSPLSAQAIAVLKDL 297

Query: 310 QPTVAGNPHVFPSDITDGPFTAVSSCLDRVCTLASINGATPHTLRHTFGSVAGDLGFSEL 369
           Q    G  ++FP     G FT  +     +  +    G TPH  R TF + A + GF   
Sbjct: 298 QRITGGGRYLFPHRSGKG-FTTPNRLTYAMRDMNLGRGTTPHCWRTTFSTWANENGFRPD 356

Query: 370 TIRAMLGH 377
            I   L H
Sbjct: 357 AIERQLAH 364