Pairwise Alignments

Query, 423 a.a., Tyrosine recombinase XerC from Xanthobacter sp. DMC5

Subject, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 97/402 (24%), Positives = 148/402 (36%), Gaps = 59/402 (14%)

Query: 12  DAFAAPTESQIVHWDSEIR---GFGVRVLPSGLKTFILQYRNAEGIKRRTNLGRYGVMTV 68
           DA+   T  +     +EI    G GVRV P G  T++ +  N  G  +R  LG Y  M +
Sbjct: 7   DAWLRATNGKPYSGKTEISHRFGLGVRVSPKGKITWVYR-ANINGKMQRIKLGEYPAMKL 65

Query: 69  EQARDKAKIKLGAVAAGEDPADEARQAR--SGMTVAEMCDWYLAEARAGNILGRKNRPIK 126
             A    + +   V  G DP    R A   S +T+ ++ D++       NI         
Sbjct: 66  RDAIQARESRAELVELGFDPRKSTRSANDDSIITLNDLIDYWAENHARDNI--------- 116

Query: 127 ASSLDMDASRIRTHITPLIGKRVVRHLTIADVEQMQADVKNGKTARPRAGGRGGKASGGA 186
               D       T ITP +G    + L + D   +    K   +A+  A           
Sbjct: 117 -KQCDALLKMFHTDITPTLGNYPAKQLELIDFMPVFLKAKRRVSAKHSA----------- 164

Query: 187 GVAGRCVGTLQAIIGHAKHKGLLSEHPTKGAKKL-----TGNKKSRRLSVAEIEALGTAI 241
                 +   + ++ +A   GLL  +     KK      T  K+SR+     ++AL  AI
Sbjct: 165 ----NLMTRFKQVLSYAVRHGLLKYNVLTELKKADVGVPTTPKRSRQ-DEQGVKALWKAI 219

Query: 242 AYAERNGENPTALGVLRLLLLTGYRREEAQAM--------RREWVHPKGGYVAFPDTKGD 293
                +  N      LRL+L+   R  E +          +R W  P+         +G 
Sbjct: 220 DDISIHESNK---NFLRLMLIFANRSNELRLAKKADFDLEKRVWTVPEENN-KVRKKQGG 275

Query: 294 AQIRAIGPAALRIVDAQPTVAGN-PHVFPSDIT--DGPFTA------VSSCLDRVCTLAS 344
           A  RAI P A +I+  Q  +  N   +FP   T  D P +A       S   DR+  L  
Sbjct: 276 AIRRAIPPLAEKIIMEQFAIWPNHTMMFPPVNTEQDRPMSANVPVDFGSKLADRIEEL-G 334

Query: 345 INGATPHTLRHTFGSVAGDLGFSELTIRAMLGHASRSVTQDY 386
               T H +R T  ++   +G        MLGH   +  Q +
Sbjct: 335 FPRTTNHDMRRTARNIWESMGVPYHVAETMLGHKVHTGVQSH 376