Pairwise Alignments

Query, 423 a.a., Tyrosine recombinase XerC from Xanthobacter sp. DMC5

Subject, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

 Score = 51.6 bits (122), Expect = 4e-11
 Identities = 93/427 (21%), Positives = 162/427 (37%), Gaps = 36/427 (8%)

Query: 3   TTKLTKRAIDAFAAPTESQIVHWDSEIRGFGVRVLPSGLKTFILQY-RNAEGIKRRTNLG 61
           T KLT + I A + P E +   +D +  G  +R+ P+G K +I  Y R   G +   + G
Sbjct: 5   TVKLTDKEIKA-SKPREKEYNLFDGD--GLRLRIKPNGSKQWIFNYYRPTNGKRANLSFG 61

Query: 62  RYGVMTVEQARDKAKIKLGAVAAGEDPADEARQARSGMTVAEMCDWYLAEARAGNILGRK 121
            Y  +++ QAR         +A G DP D+ +  R      E+ +             ++
Sbjct: 62  MYPDISLLQARKSLLSAKELIAQGIDPQDDRK--RQQQVHKEIHEHTFENVTKDWFAIKQ 119

Query: 122 NRPIKASSLDMDASRIRTHITPLIGKRVVRHLTIADVEQMQADVKNGKTARPRAGGRGGK 181
           N      +LD+  S +  HI P I  + V+ +T  ++ ++   +               +
Sbjct: 120 NDVTPDYALDIWRS-LELHIFPHISDKPVKAITAPEIIELLKPI---------------E 163

Query: 182 ASGGAGVAGRCVGTLQAIIGHAKHKGLLSEHPTKGAK---KLTGNKKSRRLSVAEIEALG 238
           A G      R    L  ++  A + GL+  +P  G K   K    +    L+ AE+  L 
Sbjct: 164 AKGSLETVKRLTQRLNEVMNFATNCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELM 223

Query: 239 TAIAYAERNGENPTALGVLRLLLLTGYRREEAQAMRREWVHPKGGYVAFPDTKGDAQIRA 298
           +AIA A       T   +L   L T  R  EA   R + ++ +      P  +   +   
Sbjct: 224 SAIANA---SIKRTTRCLLEWQLHTMTRPAEASGARWDEINWEEKVWTIPAERMKKRREH 280

Query: 299 IGPAA---LRIVDAQPTVAGN-PHVFPSDITDGPFTAVSSCLDRVCTLASINGATPHTLR 354
             P     L +++    ++G+   +FPSD          +    +  +        H LR
Sbjct: 281 RIPLTEQMLALLEVMKPISGHRDFIFPSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLR 340

Query: 355 HTFGSVAGDLGFSELTIRAMLGHA-SRSVTQDYIHID--EALKLAVRMTSDEIEKLLAKG 411
               +   + GF    + + L H     V   Y   D  E  K  +   S+ IE+  A+G
Sbjct: 341 SLASTTLNEQGFDPDLVESALAHVDDNQVRSAYNRTDYLERRKPMMCWWSEHIEE-AARG 399

Query: 412 AQRTSAT 418
           +   + T
Sbjct: 400 SLSVTGT 406